RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, human

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOBTB3-213	ENST00000512878	ADRM1	Q16186	407 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ZSWIM7	Q19AV6	140 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878		Q5PR19	223 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	PAQR6	Q6TCH4	344 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	C20orf204	Q6ZNR8	217 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	LRRC75A-AS1	Q8N1F1	130 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	PIGX	Q8TBF5	258 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	HSD17B8	Q92506	261 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	NEUROG1	Q92886	237 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	PIGT	Q969N2	578 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	C3orf49	Q96BT1	292 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ZHX1-C8orf76	Q96EF9	292 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	THOC1	Q96FV9	657 aa	Known RBP	11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	PERP	Q96FX8	193 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	POM121	Q96HA1	1249 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	CCL19	Q99731	98 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	POTEKP	Q9BYX7	375 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	RAD21L1	Q9H4I0	556 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	EMC3	Q9P0I2	261 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	NOSIP	Q9Y314	301 aa	Known RBP	11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	IFT52	Q9Y366	437 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	FLVCR1	Q9Y5Y0	555 aa		11.3	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	SVEP1	Q4LDE5	3571 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ABCA1	O95477	2261 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	TMEM247	A6NEH6	219 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	TMEM229A	B2RXF0	380 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	PDLIM1	O00151	329 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	IGHV3-9	P01782	118 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	UQCRB	P14927	111 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ETS2	P15036	469 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	GPX2	P18283	190 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ADSL	P30566	484 aa	Predicted RBP	11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	P2RY4	P51582	365 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	FOXG1	P55316	489 aa	Predicted RBP	11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	IRX1	P78414	480 aa	Predicted RBP	11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	HOXC5	Q00444	222 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	CEACAM7	Q14002	265 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	GLIPR1L2	Q4G1C9	344 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ZNF311	Q5JNZ3	666 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	NCMAP	Q5T1S8	102 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	FBXW9	Q5XUX1	488 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	RETREG3	Q86VR2	466 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ZNF100	Q8IYN0	542 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	TMEM99	Q8N816	258 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	NFKBID	Q8NI38	313 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	BBS10	Q8TAM1	723 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	SLC35B4	Q969S0	331 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	TMEM38A	Q9H6F2	299 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	NPAP1	Q9NZP6	1156 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	MALT1	Q9UDY8	824 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ZNF232	Q9UNY5	417 aa		11.29	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	RTTN	Q86VV8	2226 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	DPRX	A6NFQ7	191 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	GPR171	O14626	319 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	HS3ST1	O14792	307 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	TPST1	O60507	370 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	SMPD2	O60906	423 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	AKR7A3	O95154	331 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ITGA5	P08648	1049 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	PPIB	P23284	216 aa	Known RBP	11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	CXCR1	P25024	350 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	PRKAR1B	P31321	381 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	EGR4	Q05215	589 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	BSPH1	Q075Z2	132 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	RUNDC3A	Q59EK9	446 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	TIMM23B	Q5SRD1	257 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	GCNT6	Q5T4J0	391 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	SHE	Q5VZ18	495 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ADAM5	Q6NVV9	412 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	CADM2	Q8N3J6	435 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	DPP10	Q8N608	796 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	ZIC4	Q8N9L1	334 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	APH1A	Q96BI3	265 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	USB1	Q9BQ65	265 aa	Known RBP	11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	NPHS2	Q9NP85	383 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	DCTN4	Q9UJW0	460 aa		11.28	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	CUBN	O60494	3623 aa		11.27	□□□□□ -0.6
RHOBTB3-213	ENST00000512878	TRIM64	A6NGJ6	449 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	TRIM64B	A6NI03	449 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	OR5H1	A6NKK0	313 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	AQP7P3	A6NL99	342 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878		A8MVM7	634 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	FTCDNL1	E5RQL4	147 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	FZD7	O75084	574 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	MRPL33	O75394	65 aa	Known RBP	11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	GPI	P06744	558 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	FOSL1	P15407	271 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	PAX1	P15863	534 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	GGT1	P19440	569 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	NCF2	P19878	526 aa	Predicted RBP	11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	HTR2A	P28223	471 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	IDUA	P35475	653 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	COPZ1	P61923	177 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	CDK6	Q00534	326 aa		11.27	□□□□□ -0.61
RHOBTB3-213	ENST00000512878	OR7A5	Q15622	319 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms