RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SHISA9B4DS77 424 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 KLF11O14901 512 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 CD5LO43866 347 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 PGM3O95394 542 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 BCHEP06276 602 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 ITGA5P08648 1049 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 GGT1P19440 569 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 PTNP21246 168 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 ACVR1BP36896 505 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 POLR2JP52435 117 aaKnown RBP9.6□□□□□ -0.87
RNF4-212ENST00000509258 SLC16A1P53985 500 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 OR2B6P58173 313 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 DSTNP60981 165 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 HPCAP84074 193 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 SLC25A3Q00325 362 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 HOXC5Q00444 222 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 FAPQ12884 760 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 AGAP6Q5VW22 663 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 PODNL1Q6PEZ8 512 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 KLHL17Q6TDP4 642 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 GALNT5Q7Z7M9 940 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 DEPDC4Q8N2C3 294 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 GLB1L3Q8NCI6 653 aaPredicted RBP9.6□□□□□ -0.87
RNF4-212ENST00000509258 OR52E4Q8NGH9 312 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 TMEM19Q96HH6 336 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 ADAD1Q96M93 576 aaKnown RBP9.6□□□□□ -0.87
RNF4-212ENST00000509258 TRIM2Q9C040 744 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 ADAM19Q9H013 955 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 IKZF5Q9H5V7 419 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 MTHFD2LQ9H903 347 aaPredicted RBP9.6□□□□□ -0.87
RNF4-212ENST00000509258 CISD1Q9NZ45 108 aaKnown RBP9.6□□□□□ -0.87
RNF4-212ENST00000509258 ZNF443Q9Y2A4 671 aaPredicted RBP9.6□□□□□ -0.87
RNF4-212ENST00000509258 PCDHB14Q9Y5E9 798 aa9.6□□□□□ -0.87
RNF4-212ENST00000509258 CIB4A0PJX0 185 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 CFAP73A6NFT4 308 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 RNF212BA8MTL3 300 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 PDLIM1O00151 329 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 FAAHO00519 579 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 GPR171O14626 319 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 UBDO15205 165 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 DNPH1O43598 174 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 NDUFS7O75251 213 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 RAD51DO75771 328 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 CD8AP01732 235 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 IGHV4-39P01824 125 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 IL6P05231 212 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 DBIP07108 87 aaKnown RBP9.59□□□□□ -0.87
RNF4-212ENST00000509258 ZCCHC18P0CG32 403 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 BMP4P12644 408 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 IL7RP16871 459 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 CRATP43155 626 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 IDH3AP50213 366 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 P2RY4P51582 365 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 POLR2HP52434 150 aaKnown RBP9.59□□□□□ -0.87
RNF4-212ENST00000509258 CDH11P55287 796 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 LGALS3BPQ08380 585 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 PDK3Q15120 406 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 GSTA3Q16772 222 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 PGGHGQ32M88 737 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 PAGE3Q5JUK9 113 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 C9orf135Q5VTT2 229 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 HMBOX1Q6NT76 420 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 TMEM108Q6UXF1 575 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 B3GLCTQ6Y288 498 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 DNM1P46Q6ZS02 220 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 SERPINA11Q86U17 422 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 CMIPQ8IY22 773 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 TRIML2Q8N7C3 387 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 TMEM99Q8N816 258 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 ZIC4Q8N9L1 334 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 OR52P1PQ8NH57 321 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 ZBTB18Q99592 522 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 WFDC6Q9BQY6 131 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 RHNO1Q9BSD3 238 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 TMEM181Q9P2C4 612 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 POU2F3Q9UKI9 436 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 NOSIPQ9Y314 301 aaKnown RBP9.59□□□□□ -0.87
RNF4-212ENST00000509258 HDGFL3Q9Y3E1 203 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 FLVCR1Q9Y5Y0 555 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 CUBNO60494 3623 aa9.59□□□□□ -0.87
RNF4-212ENST00000509258 TRBV5-3A0A0A0MS03 114 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 FAM234BA2RU67 622 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 LIPT2A6NK58 231 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 SLCO1B7G3V0H7 640 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 AKR7A3O95154 331 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 KRT75O95678 551 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 THBS1P07996 1170 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 SLC1A3P43003 542 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 MRPL19P49406 292 aaKnown RBP9.58□□□□□ -0.88
RNF4-212ENST00000509258 CLK1P49759 484 aaKnown RBP9.58□□□□□ -0.88
RNF4-212ENST00000509258 ANXA11P50995 505 aaKnown RBP9.58□□□□□ -0.88
RNF4-212ENST00000509258 DSCR9P59020 149 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 CHRFAM7AQ494W8 412 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 C6orf10Q5SRN2 563 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 C1QTNF12Q5T7M4 302 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 FBXW9Q5XUX1 488 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 OR7E24Q6IFN5 339 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 DTX2Q86UW9 622 aa9.58□□□□□ -0.88
RNF4-212ENST00000509258 HIPK1Q86Z02 1210 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms