RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 ZNF704Q6ZNC4 412 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF550Q7Z398 422 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 C16orf62Q7Z3J2 963 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 DTX2Q86UW9 622 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 KIRREL3Q8IZU9 778 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 MMP21Q8N119 569 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FBXL14Q8N1E6 418 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC43A2Q8N370 569 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 BANPQ8N9N5 519 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 WDSUB1Q8N9V3 476 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ACBD4Q8NC06 268 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR5M1Q8NGP8 315 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR2V1Q8NHB1 315 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 B4GALNT2Q8NHY0 566 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FNDC9Q8TBE3 224 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 XAGE5Q8WWM1 108 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 OSTF1Q92882 214 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 HGDQ93099 445 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 RFKQ969G6 155 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CNRIP1Q96F85 164 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 METTL2AQ96IZ6 378 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 RADILQ96JH8 1075 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 PPP3R2Q96LZ3 170 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 KLHL15Q96M94 604 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 WFIKKN1Q96NZ8 548 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 MS4A4EQ96PG1 132 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CCT7Q99832 543 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRMOQ9BU70 441 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ARMC7Q9H6L4 198 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 PLAC1Q9HBJ0 212 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 LRTM1Q9HBL6 345 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 MYNNQ9NPC7 610 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 YAE1D1Q9NRH1 226 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FARSBQ9NSD9 589 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZCCHC3Q9NUD5 404 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 C1orf109Q9NX04 203 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 UPB1Q9UBR1 384 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FBXL2Q9UKC9 423 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 C19orf53Q9UNZ5 99 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 LAMP3Q9UQV4 416 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMED5Q9Y3A6 229 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF337Q9Y3M9 751 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 RNF115Q9Y4L5 304 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 POLR3HQ9Y535 204 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 TIMM22Q9Y584 194 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLDN16Q9Y5I7 305 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ANKHD1Q8IWZ3 2542 aaKnown RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 A0A1W2PRB8 838 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 RNF212BA8MTL3 300 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 MYO1GB0I1T2 1018 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 UBFD1O14562 309 aaKnown RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 GPR171O14626 319 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TNFSF11O14788 317 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 HS3ST1O14792 307 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 AZIN1O14977 448 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ANKRD28O15084 1053 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CXCL13O43927 109 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TSPAN2O60636 221 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 LYPLA1O75608 230 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 INMTO95050 263 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 WISP3O95389 354 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TGM6O95932 706 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TBX6O95947 436 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 AK1P00568 194 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 OPN1LWP04000 364 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 YES1P07947 543 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 IL6RP08887 468 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ABHD2P08910 425 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 NDUFB7P17568 137 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CD53P19397 219 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PGCP20142 388 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 BTF3P20290 206 aaKnown RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FKBP2P26885 142 aaKnown RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRKAR1BP31321 381 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CHI3L1P36222 383 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 MAGEA8P43361 318 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PTH2RP49190 550 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PCYT1AP49585 367 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRKAA2P54646 552 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLDN18P56856 261 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 DSCR9P59020 149 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 COPZ1P61923 177 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 RPL38P63173 70 aaKnown RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 IL1RL1Q01638 556 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 GALNT1Q10472 559 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 SCGB2A2Q13296 93 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PMS2P11Q13670 270 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CARTPTQ16568 116 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLEC12BQ2HXU8 276 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM176BQ3YBM2 270 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CHRFAM7AQ494W8 412 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PLAC9Q5JTB6 97 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM209BQ5JX69 171 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 DCST1Q5T197 706 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 LIPMQ5VYY2 423 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 HMBOX1Q6NT76 420 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC22A25Q6T423 547 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZYG11AQ6WRX3 759 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ABHD12BQ7Z5M8 362 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms