RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CCNA1P78396 465 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 BEX3Q00994 111 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 CHIT1Q13231 466 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 PPIL2Q13356 520 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 SIX1Q15475 284 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 EXOC3L4Q17RC7 722 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 LRRC36Q1X8D7 754 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF181Q2M3W8 571 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 RABGAP1LQ5R372 815 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 METTL11BQ5VVY1 283 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 NKAIN2Q5VXU1 208 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 RTL6Q6ICC9 239 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC47A2Q86VL8 602 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 WDR49Q8IV35 697 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 PARP8Q8N3A8 854 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 TCAIMQ8N3R3 496 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 LIX1Q8N485 282 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 UBL4BQ8N7F7 174 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 GVQW1Q8N7I0 195 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 C4orf32Q8N8J7 132 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 COLGALT1Q8NBJ5 622 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 DENND6BQ8NEG7 585 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 C17orf47Q8NEP4 570 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 OR13F1Q8NGS4 319 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 OR2T34Q8NGX1 318 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 OR4L1Q8NH43 312 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 MCOLN3Q8TDD5 553 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 SSC4DQ8WTU2 575 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 NCLNQ969V3 563 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 GPR137Q96N19 417 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 RBM14Q96PK6 669 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 RAB40CQ96S21 281 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 CYTH2Q99418 400 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 SERPINI1Q99574 410 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 FUNDC2Q9BWH2 189 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 TSSK1BQ9BXA7 367 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF717Q9BY31 904 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 NMUR2Q9GZQ4 415 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC26A1Q9H2B4 701 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 LY9Q9HBG7 655 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 MRPL40Q9NQ50 206 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 POLE3Q9NRF9 147 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 PAK1IP1Q9NWT1 392 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 B3GNT2Q9NY97 397 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 MRPL39Q9NYK5 338 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 ERVK-18Q9QC07 812 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 EIF3KQ9UBQ5 218 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 STOML2Q9UJZ1 356 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 MGAT4AQ9UM21 535 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 PACSIN2Q9UNF0 486 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 DIMT1Q9UNQ2 313 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 MROH5Q6ZUA9 1318 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 KDM3BQ7LBC6 1761 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 RTL9Q8NET4 1388 aa3.12□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF142P52746 1687 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 C1orf232A0A0U1RR37 186 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 IGLON5A6NGN9 336 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 SHISA7A6NL88 538 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 YJEFN3A6XGL0 299 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 SRRM4A7MD48 611 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ERI2A8K979 691 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 CENPXA8MT69 81 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 NEDD8-MDP1E9PL57 170 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 CCRL2O00421 344 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 SNNO75324 88 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TRIM3O75382 744 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 CSO75390 466 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TOM1L1O75674 476 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 OR6A2O95222 327 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 LYPLA2O95372 231 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TXNDC12O95881 172 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 GOT2P00505 430 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 OPN1MWP04001 364 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 KRT8P05787 483 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 CAPN1P07384 714 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 HIST1H2AGP0C0S8 130 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 OPN1MW2P0DN77 364 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 OPN1MW3P0DN78 364 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 MYL2P10916 166 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 MBL2P11226 248 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 GATA1P15976 413 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 F8A1P23610 371 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 SFNP31947 248 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 RPA3P35244 121 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ID1P41134 155 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TNFRSF4P43489 277 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 HLCSP50747 726 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 HERV-K104P63124 156 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ACY1Q03154 408 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ENPEPQ07075 957 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 MRPL28Q13084 256 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 RIGQ13278 110 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC39A6Q13433 755 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 FASTKQ14296 549 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 GAMTQ14353 236 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 RFTN1Q14699 578 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 BRMS1LQ5PSV4 323 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 FAM182AQ5T1J6 154 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PRAMEF7Q5VXH5 474 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TIGD3Q6B0B8 471 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms