RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 TRMT61AQ96FX7 289 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 FCRL1Q96LA6 429 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 RBP7Q96R05 134 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ERGIC2Q96RQ1 377 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TMEM209Q96SK2 561 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 RTP3Q9BQQ7 232 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MEAF6Q9HAF1 191 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TPT1P8Q9HAU6 139 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 XPNPEP3Q9NQH7 507 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CUTCQ9NTM9 273 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 USE1Q9NZ43 259 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TFCP2L1Q9NZI6 479 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF490Q9ULM2 529 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 FLVCR2Q9UPI3 526 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MRPS33Q9Y291 106 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ZFP30Q9Y2G7 519 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 OR51B4Q9Y5P0 310 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 WNT6Q9Y6F9 365 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 DENND4AQ7Z401 1863 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MYO5AQ9Y4I1 1855 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 FAM237BA0A1B0GVD1 139 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 PRSS37A4D1T9 235 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 SDR42E2A6NKP2 422 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ANHXE9PGG2 379 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 F6UZH7 168 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF561-AS1K7EIQ3 104 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 AP4M1O00189 453 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MSH4O15457 936 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CPNE6O95741 557 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 PMP2P02689 132 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ALPIP09923 528 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 PET100P0DJ07 73 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 C8orf89P0DMQ9 161 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 HOXB2P14652 356 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 B4GALT1P15291 398 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 BCKDHBP21953 392 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ARL4AP40617 200 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 LGALS7P47929 136 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 RGS4P49798 205 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ASCL1P50553 236 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 WNT4P56705 351 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MRPS10P82664 201 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MC2RQ01718 297 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 SLC10A1Q14973 349 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 NPY5RQ15761 445 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 KCTD19Q17RG1 926 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 RFTN2Q52LD8 501 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 LGSNQ5TDP6 509 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 PNCKQ6P2M8 343 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 FAM180AQ6UWF9 173 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 NHLRC1Q6VVB1 395 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 DEF8Q6ZN54 512 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 GAREM2Q75VX8 874 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 SLC16A9Q7RTY1 509 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CBLN2Q8IUK8 224 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 HORMAD2Q8N7B1 307 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 AMER2Q8N7J2 671 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 FADS6Q8N9I5 356 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ZSCAN4Q8NAM6 433 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TMEM185AQ8NFB2 350 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 UBASH3BQ8TF42 649 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ANKRD9Q96BM1 317 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ARSGQ96EG1 525 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 BTN2A3PQ96KV6 586 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF350Q9GZX5 532 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 NXF2Q9GZY0 626 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CHRNA10Q9GZZ6 450 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 SIK2Q9H0K1 926 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ATXN3LQ9H3M9 355 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 SRMSQ9H3Y6 488 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 NSUN3Q9H649 340 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 EML4Q9HC35 981 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ANKHQ9HCJ1 492 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 PLEKHJ1Q9NW61 149 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 SLC17A6Q9P2U8 582 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 LRIT1Q9P2V4 623 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 A3GALT2U3KPV4 340 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 DUOX1Q9NRD9 1551 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 GLTPD2A6NH11 291 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 MYMKA6NI61 221 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 TMEM200CA6NKL6 621 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 ANKRD63C9JTQ0 380 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 E7ENX8 843 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 M0R036 132 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 DLL1O00548 723 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 CDIPTO14735 213 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 KLF11O14901 512 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 CCL25O15444 150 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 RCBTB2O95199 551 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 GH1P01241 217 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 AMY2AP04746 511 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 IRF2P14316 349 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 TYRP14679 529 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 CSNK2A2P19784 350 aaPredicted RBP4.57□□□□□ -1.68
EPHA3-202ENST00000452448 AMY2BP19961 511 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 TBPP20226 339 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 FPR1P21462 350 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 CALCRP30988 508 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 KDELR2P33947 212 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 ACVR1BP36896 505 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms