RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 MAP2K6P52564 334 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 BNIP2Q12982 314 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 SLC17A1Q14916 467 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 ZNF672Q499Z4 452 aaPredicted RBP18.28■□□□□ 0.52
SDC1-205ENST00000447124 LIN52Q52LA3 116 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 TTMPQ5BVD1 217 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 MSRB3Q8IXL7 192 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 OR52E4Q8NGH9 312 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 NAA11Q9BSU3 229 aaPredicted RBP18.28■□□□□ 0.52
SDC1-205ENST00000447124 TRIM2Q9C040 744 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 CXorf56Q9H5V9 222 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 SLC25A37Q9NYZ2 338 aa18.28■□□□□ 0.52
SDC1-205ENST00000447124 LIPT2A6NK58 231 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 OR5H1A6NKK0 313 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 SHISA9B4DS77 424 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 PDLIM1O00151 329 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 EIF1BO60739 113 aaKnown RBP18.27■□□□□ 0.52
SDC1-205ENST00000447124 TMCC2O75069 709 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 RAD51DO75771 328 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 BMP2P12643 396 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 ATP5J2P56134 94 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 FAPQ12884 760 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 CEACAM7Q14002 265 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 PGGHGQ32M88 737 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 P2RY8Q86VZ1 359 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 CADM2Q8N3J6 435 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 TMEM99Q8N816 258 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 ZIC4Q8N9L1 334 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 SMAP2Q8WU79 429 aaPredicted RBP18.27■□□□□ 0.52
SDC1-205ENST00000447124 MAL2Q969L2 176 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 FBXW5Q969U6 566 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 MUCL1Q96DR8 90 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 MUS81Q96NY9 551 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 SPATA9Q9BWV2 254 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 BCL2L10Q9HD36 194 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 TCF7L2Q9NQB0 619 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 SLC25A15Q9Y619 301 aa18.27■□□□□ 0.52
SDC1-205ENST00000447124 NSD1Q96L73 2696 aaPredicted RBP18.27■□□□□ 0.52
SDC1-205ENST00000447124 PLCE1Q9P212 2302 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 A0A1W2PR80 420 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 CIB4A0PJX0 185 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 AKR7A3O95154 331 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 TGDSO95455 350 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 CD8AP01732 235 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 THBS1P07996 1170 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 ITGA5P08648 1049 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 CXCR1P25024 350 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 RPS4XP62701 263 aaKnown RBP18.26■□□□□ 0.51
SDC1-205ENST00000447124 GABRA6Q16445 453 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 RNF220Q5VTB9 566 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 WBP2NLQ6ICG8 309 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 BLOC1S3Q6QNY0 202 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 PAQR6Q6TCH4 344 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 SERPINA11Q86U17 422 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 C10orf111Q8N326 155 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 WDR31Q8NA23 367 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 OR52N5Q8NH56 324 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 ATP6V1G3Q96LB4 118 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 SLC7A10Q9NS82 523 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 ASB6Q9NWX5 421 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 THUMPD1Q9NXG2 353 aaKnown RBP18.26■□□□□ 0.51
SDC1-205ENST00000447124 MALT1Q9UDY8 824 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 PRDM4Q9UKN5 801 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 ZNF232Q9UNY5 417 aa18.26■□□□□ 0.51
SDC1-205ENST00000447124 MAGED1Q9Y5V3 778 aaPredicted RBP18.26■□□□□ 0.51
SDC1-205ENST00000447124 A0A096LPI6 279 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 CCT8L1PA6NM43 557 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 HEXAP06865 529 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 UQCRBP14927 111 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 IDUAP35475 653 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 P2RY4P51582 365 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 HOXC5Q00444 222 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 LARS2Q15031 903 aaKnown RBP18.25■□□□□ 0.51
SDC1-205ENST00000447124 OR7A5Q15622 319 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 PAGE3Q5JUK9 113 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 OTUD3Q5T2D3 398 aaPredicted RBP18.25■□□□□ 0.51
SDC1-205ENST00000447124 TSPO2Q5TGU0 170 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 LRRC8CQ8TDW0 803 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 C3orf49Q96BT1 292 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 CCDC28BQ9BUN5 200 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 A4GALTQ9NPC4 353 aa18.25■□□□□ 0.51
SDC1-205ENST00000447124 CISD1Q9NZ45 108 aaKnown RBP18.25■□□□□ 0.51
SDC1-205ENST00000447124 ANK3Q12955 4377 aaKnown RBP18.24■□□□□ 0.51
SDC1-205ENST00000447124 POLR3GO15318 223 aaPredicted RBP18.24■□□□□ 0.51
SDC1-205ENST00000447124 FRS3O43559 492 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 NPIPB7O75200 414 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 GPIP06744 558 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 CDKN1AP38936 164 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 ZNF311Q5JNZ3 666 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 LRIF1Q5T3J3 769 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 C9orf135Q5VTT2 229 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 CASP12Q6UXS9 341 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 ZNF385AQ96PM9 386 aaKnown RBP18.24■□□□□ 0.51
SDC1-205ENST00000447124 C1QTNF6Q9BXI9 259 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 PARPBPQ9NWS1 579 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 TAS2R16Q9NYV7 291 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 CCDC167Q9P0B6 97 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 SLC9A8Q9Y2E8 581 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 IFT52Q9Y366 437 aa18.24■□□□□ 0.51
SDC1-205ENST00000447124 AQP7P3A6NL99 342 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms