RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 PPIBP23284 216 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 CTSSP25774 331 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 PRDX6P30041 224 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 GABRA3P34903 492 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 PPICP45877 212 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 KHKP50053 298 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 SSR4P51571 173 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 MLF1P58340 268 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 LINC00310P59036 64 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 SELENOVP59797 346 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 SPCS3P61009 180 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 PHC1P78364 1004 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 MRPS22P82650 360 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 TXNL4AP83876 142 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 Q0VFX4 171 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 MGAT2Q10469 447 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 MFAP5Q13361 173 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 PMS2P11Q13670 270 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 RCAN2Q14206 197 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 EBPQ15125 230 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 CNN3Q15417 329 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF311Q5JNZ3 666 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ACER2Q5QJU3 275 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 FHL5Q5TD97 284 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 STEAP3Q658P3 488 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 B3GNTL1Q67FW5 361 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 TCTN3Q6NUS6 607 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C1orf94Q6P1W5 598 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 RPTNQ6XPR3 784 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 RTL4Q6ZR62 310 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 LINC00696Q6ZRV3 163 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C6orf120Q7Z4R8 191 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 KIF18BQ86Y91 864 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 HPS6Q86YV9 775 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ARMC8Q8IUR7 673 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 CHERPQ8IWX8 916 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C9orf40Q8IXQ3 194 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 GPALPP1Q8IXQ4 340 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF615Q8N8J6 731 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 COX18Q8N8Q8 333 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 POMGNT2Q8NAT1 580 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C17orf47Q8NEP4 570 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 OR5AK3PQ8NH89 298 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C16orf52Q8NHV5 167 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C9orf43Q8TAL5 461 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 GPR151Q8TDV0 419 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 RASSF5Q8WWW0 418 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ASB15Q8WXK1 588 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 KTI12Q96EK9 354 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C1GALT1C1Q96EU7 318 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 LCORQ96JN0 433 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 UTP23Q9BRU9 249 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 INPP5KQ9BT40 448 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ACTRT3Q9BYD9 372 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 WWTR1Q9GZV5 400 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 VCXQ9H320 206 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 CXorf36Q9H7Y0 433 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 METTL8Q9H825 291 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 EVA1AQ9H8M9 152 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ANKRA2Q9H9E1 313 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 FOLH1BQ9HBA9 442 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 GCM1Q9NP62 436 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 DIABLOQ9NR28 239 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 C19orf12Q9NSK7 152 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 EXD2Q9NVH0 621 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ARMCX1Q9P291 453 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 MYOTQ9UBF9 498 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF223Q9UK11 482 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 HEMK1Q9Y5R4 338 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 NPFFR2Q9Y5X5 522 aa5.65□□□□□ -1.5
ECHDC1-208ENST00000436638 URB1O60287 2271 aaKnown RBP5.65□□□□□ -1.51
ECHDC1-208ENST00000436638 LAMA1P25391 3075 aa5.65□□□□□ -1.51
ECHDC1-208ENST00000436638 DNAH14Q0VDD8 3507 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 SPTBN2O15020 2390 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 TRAV20A0A0B4J274 112 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 OR5H15A6NDH6 313 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 CLIC1O00299 241 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 SYT5O00445 386 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 TP53I11O14683 189 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 LRRTM2O43300 516 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 PRKNO60260 465 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 SCN2BO60939 215 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 REM1O75628 298 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 CEACAM4O75871 244 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 OR2J2O76002 312 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 AHSA1O95433 338 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 AK1P00568 194 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 HMGN2P05204 90 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 DBHP09172 617 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 COX4I1P13073 169 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 ATP6V1C1P21283 382 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 S1PR1P21453 382 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 IL12BP29460 328 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 GRK5P34947 590 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 CDKN2CP42773 168 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 CRATP43155 626 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 KIR3DL2P43630 455 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 CAPZA2P47755 286 aa5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 ZFP36L2P47974 494 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-208ENST00000436638 RFX3P48380 749 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms