RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SMARCD3Q6STE5 483 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 TP53INP1Q96A56 240 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 THOC3Q96J01 351 aaKnown RBP13.76□□□□□ -0.21
SCAF11-204ENST00000395454 C12orf10Q9HB07 376 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 ERGIC3Q9Y282 383 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 EFCAB9A8MZ26 197 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 K7ENP7 123 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 SCDO00767 359 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 PRKNO60260 465 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-204ENST00000395454 SERPINA7P05543 415 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 HTR1FP30939 366 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 UGT2B10P36537 528 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 NDUFAF6Q330K2 333 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 WBP2NLQ6ICG8 309 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 INO80CQ6PI98 192 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-204ENST00000395454 NUP54Q7Z3B4 507 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 OR13C2Q8NGS9 318 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 LIPHQ8WWY8 451 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 ARSGQ96EG1 525 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 OPALINQ96PE5 141 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 TMEM43Q9BTV4 400 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 DEFB126Q9BYW3 111 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 LAT2Q9GZY6 243 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 CMC2Q9NRP2 79 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 GPR52Q9Y2T5 361 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 ALG1L2C9J202 215 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 ZNF264O43296 627 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 ZFAND5O76080 213 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 BMP7P18075 431 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 NR4A1P22736 598 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 SLC9A3P48764 834 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 PNLIPRP2P54317 469 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 COPZ1P61923 177 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 TMED1Q13445 227 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 SPHARQ15513 63 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 HLA-DQA1Q5Y7H0 255 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 THSD4Q6ZMP0 1018 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 SIRT6Q8N6T7 355 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
SCAF11-204ENST00000395454 NDNFQ8TB73 568 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 RPL3LQ92901 407 aaKnown RBP13.75□□□□□ -0.21
SCAF11-204ENST00000395454 ENKD1Q9H0I2 346 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 HINT3Q9NQE9 182 aaKnown RBP13.75□□□□□ -0.21
SCAF11-204ENST00000395454 RPS6KB2Q9UBS0 482 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 CLEC2DQ9UHP7 191 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
SCAF11-204ENST00000395454 CNTRLQ7Z7A1 2325 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 MPDZO75970 2070 aa13.75□□□□□ -0.21
SCAF11-204ENST00000395454 IGKV1D-42A0A075B6H8 117 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 A6NL46 340 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 J3QRE1 110 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 CCRL2O00421 344 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 KPNA4O00629 521 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 OIP5O43482 229 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 AIREO43918 545 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ICOSLGO75144 302 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 PPM1BO75688 479 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 IGHA1P01876 353 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 PNMTP11086 282 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 FUT1P19526 365 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 GADD45AP24522 165 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 SLC6A8P48029 635 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 MLLT10P55197 1068 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 VBP1P61758 197 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 NCS1P62166 190 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 TUBA1BP68363 451 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 CXADRP78310 365 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 MLLT11Q13015 90 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 SSX1Q16384 188 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 MOGQ16653 247 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 TUBA1AQ71U36 451 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ATG4DQ86TL0 474 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 GID4Q8IVV7 300 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 CADM2Q8N3J6 435 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 GALNT16Q8N428 558 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ZNF485Q8NCK3 441 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 OR8K3Q8NH51 312 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 RNFT2Q96EX2 444 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 PLEKHA8Q96JA3 519 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ADOQ96SZ5 270 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 MCCC2Q9HCC0 563 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 OSGIN1Q9UJX0 560 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ADAM10O14672 748 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 SAGP10523 405 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 HPGDP15428 266 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 PTNP21246 168 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 MST1P26927 711 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ABCD3P28288 659 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 CDH11P55287 796 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 RPS4XP62701 263 aaKnown RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 FOXK2Q01167 660 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 DCTN2Q13561 401 aaKnown RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 MED22Q15528 200 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 TIMM50Q3ZCQ8 353 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ZNF362Q5T0B9 420 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 ARMC4Q5T2S8 1044 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 FCRLBQ6BAA4 426 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 C16orf47Q6ZP98 133 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms