RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 HTR3BO95264 441 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 KCNJ5P48544 419 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 KCNJ3P48549 501 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TAS2R38P59533 333 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 SRSF5Q13243 272 aaKnown RBP8.17□□□□□ -1.1
RTN4-206ENST00000394611 FAM76BQ5HYJ3 339 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TMEM31Q5JXX7 168 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 METTL11BQ5VVY1 283 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ADAM5Q6NVV9 412 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 FAM111BQ6SJ93 734 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 SLC9B2Q86UD5 537 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 PLPP7Q8NBV4 271 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 LCN9Q8WX39 176 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 MARVELD1Q9BSK0 173 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TMEM168Q9H0V1 697 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ACSL5Q9ULC5 683 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 RPH3AQ9Y2J0 694 aaPredicted RBP8.17□□□□□ -1.1
RTN4-206ENST00000394611 TSPAN11A1L157 253 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 EPOPA6NHQ4 379 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 LEFTY2O00292 366 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 PEX12O00623 359 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 SC5DO75845 299 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TYRP1P17643 537 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 MPEG1Q2M385 716 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 H3F3CQ6NXT2 135 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 GPALPP1Q8IXQ4 340 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 CCDC36Q8IYA8 594 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ZNF101Q8IZC7 436 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 RFLNBQ8N5W9 214 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ACBD4Q8NC06 268 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 STOML3Q8TAV4 291 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 SLC22A8Q8TCC7 542 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TMED6Q8WW62 240 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 SLC38A3Q99624 504 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TAPBPLQ9BX59 468 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ZNF334Q9HCZ1 680 aaPredicted RBP8.17□□□□□ -1.1
RTN4-206ENST00000394611 ACKR4Q9NPB9 350 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 PRR13Q9NZ81 148 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ESPL1Q14674 2120 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 MDC1Q14676 2089 aaKnown RBP8.17□□□□□ -1.1
RTN4-206ENST00000394611 TRANK1O15050 2925 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TRDV1A0A1B0GX56 115 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 H3BNC9 293 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 PYCARD-AS1I3L0S3 204 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 C1orf105O95561 183 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 HLA-AP01891 365 aaKnown RBP8.17□□□□□ -1.1
RTN4-206ENST00000394611 SPARCP09486 303 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ART1P52961 327 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 NDUFA9Q16795 377 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 C2orf27AQ580R0 203 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 C3orf38Q5JPI3 329 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ARHGAP40Q5TG30 622 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 OR14C36Q8NHC7 312 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ZNF461Q8TAF7 563 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 SUN3Q8TAQ9 357 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 ADAMTS14Q8WXS8 1223 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 DCUN1D4Q92564 292 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 TCEAL4Q96EI5 215 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 PRRC1Q96M27 445 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 RSRP1Q9BUV0 290 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 PARPBPQ9NWS1 579 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 BACE2Q9Y5Z0 518 aa8.17□□□□□ -1.1
RTN4-206ENST00000394611 DOCK6Q96HP0 2047 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 REV3LO60673 3130 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 IMPA2O14732 288 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 PRAMEF2O60811 474 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 ITGA10O75578 1167 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 NME2P22392 152 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TLX1P31314 330 aaPredicted RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 TRHRP34981 398 aaPredicted RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 IRS1P35568 1242 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 DNASE1L1P49184 302 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TEAD2Q15562 447 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 SLC9A3R2Q15599 337 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 PRSS53Q2L4Q9 553 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 ZNF628Q5EBL2 1059 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TMEM17Q86X19 198 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 STX12Q86Y82 276 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 CHTF18Q8WVB6 975 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 BPIFA2Q96DR5 249 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 SLC25A44Q96H78 314 aaPredicted RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 OR7D2Q96RA2 312 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 ARHGAP9Q9BRR9 750 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 LGR4Q9BXB1 951 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 NKX6-2Q9C056 277 aaPredicted RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 EIF5A2Q9GZV4 153 aaKnown RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 SYT4Q9H2B2 425 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 PLEKHM1Q9Y4G2 1056 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TSC2P49815 1807 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 CACNA1GO43497 2377 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 A0A0A6YYH2 397 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TRIM64BA6NI03 449 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 A6NJ64 397 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 QSOX1O00391 747 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 GAPDHSO14556 408 aaPredicted RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 CDC42EP2O14613 210 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 CTNSO60931 367 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 CXCL14O95715 111 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 EFEMP2O95967 443 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 SOD2P04179 222 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms