RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 V9GYY5 206 aaPredicted RBP13.79□□□□□ -0.2
DDX55-202ENST00000354291 LYNX1G3V0Z9 82 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 KLF11O14901 512 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 MRPL33O75394 65 aaKnown RBP13.78□□□□□ -0.2
DDX55-202ENST00000354291 H6PDO95479 791 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 LYNX1P0DP58 116 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 NTF4P34130 210 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 RPL14P50914 215 aaKnown RBP13.78□□□□□ -0.2
DDX55-202ENST00000354291 NDUFAF6Q330K2 333 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 FAHD2BQ6P2I3 314 aaPredicted RBP13.78□□□□□ -0.2
DDX55-202ENST00000354291 CROCCP2Q86T23 111 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 LRRC17Q8N6Y2 441 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 ZNF781Q8N8C0 355 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 OR5AK3PQ8NH89 298 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 WDR60Q8WVS4 1066 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 MRPL24Q96A35 216 aaKnown RBP13.78□□□□□ -0.2
DDX55-202ENST00000354291 TMEM186Q96B77 213 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 ZNF524Q96C55 264 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 FAHD2AQ96GK7 314 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 OR7D2Q96RA2 312 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 SDF2Q99470 211 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 SAP130Q9H0E3 1048 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 AKTIPQ9H8T0 292 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 UPB1Q9UBR1 384 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 ICAM5Q9UMF0 924 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 GRIP1Q9Y3R0 1128 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 DTNAQ9Y4J8 743 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 SPEF1Q9Y4P9 236 aa13.78□□□□□ -0.2
DDX55-202ENST00000354291 NPIPB9F8W1W9 429 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 SULT2B1O00204 365 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 RNASET2O00584 256 aaKnown RBP13.77□□□□□ -0.21
DDX55-202ENST00000354291 AK1P00568 194 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 ERCC1P07992 297 aaPredicted RBP13.77□□□□□ -0.21
DDX55-202ENST00000354291 EPHA1P21709 976 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 MATN1P21941 496 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 SOAT1P35610 550 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 SLC1A6P48664 564 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 DIO1P49895 249 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 PPOXP50336 477 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 ARFIP2P53365 341 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 PRPS1P60891 318 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 ADIPOQQ15848 244 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 OR4F3Q6IEY1 312 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 C6orf120Q7Z4R8 191 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 LRRC34Q8IZ02 419 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 ZNF786Q8N393 782 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 VPS37AQ8NEZ2 397 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 OR8J2Q8NGG1 315 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 UBASH3BQ8TF42 649 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 NEU4Q8WWR8 484 aaPredicted RBP13.77□□□□□ -0.21
DDX55-202ENST00000354291 PPP1R36Q96LQ0 422 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 DPY30Q9C005 99 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 NMUR2Q9GZQ4 415 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 CENPHQ9H3R5 247 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 PLK3Q9H4B4 646 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 NARFLQ9H6Q4 476 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 ZNF281Q9Y2X9 895 aa13.77□□□□□ -0.21
DDX55-202ENST00000354291 IGKV3D-15A0A087WSY6 115 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 SH3PXD2BA1X283 911 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 ZNF264O43296 627 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 ZNF500O60304 480 aaPredicted RBP13.76□□□□□ -0.21
DDX55-202ENST00000354291 EIF4E2O60573 245 aaKnown RBP13.76□□□□□ -0.21
DDX55-202ENST00000354291 STX11O75558 287 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 AGR2O95994 175 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 WNT11O96014 354 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 CDH2P19022 906 aaPredicted RBP13.76□□□□□ -0.21
DDX55-202ENST00000354291 RIN1Q13671 783 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDX55-202ENST00000354291 ANXA8L1Q5VT79 327 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 KLHL24Q6TFL4 600 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 TMPPEQ6ZT21 453 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 MTDHQ86UE4 582 aaKnown RBP13.76□□□□□ -0.21
DDX55-202ENST00000354291 TMCO5AQ8N6Q1 288 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 ZNF614Q8N883 585 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 OR5D16Q8NGK9 328 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 OR5W2Q8NH69 310 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 DNAJA3Q96EY1 480 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 LRRC37BQ96QE4 947 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 C20orf27Q9GZN8 174 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 QRSL1Q9H0R6 528 aaKnown RBP13.76□□□□□ -0.21
DDX55-202ENST00000354291 KCNK9Q9NPC2 374 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 EXD2Q9NVH0 621 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 MALT1Q9UDY8 824 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 RAB21Q9UL25 225 aa13.76□□□□□ -0.21
DDX55-202ENST00000354291 PRSS51A0A1B0GVH4 220 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 UBL4AP11441 157 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 SLC1A3P43003 542 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 CCR4P51679 360 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 CSNK2A1P68400 391 aaPredicted RBP13.75□□□□□ -0.21
DDX55-202ENST00000354291 TGFBR3Q03167 851 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 FOXL1Q12952 345 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 STX3Q13277 289 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 CBFBQ13951 182 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 PDK3Q15120 406 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 QPRTQ15274 297 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 EFNB3Q15768 340 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 ZNF141Q15928 474 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 DPY19L1Q2PZI1 675 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 ARHGAP11BQ3KRB8 267 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms