RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR2A5Q96R48 311 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 GPR21Q99679 349 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 NAPGQ99747 312 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC25A23Q9BV35 468 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM129AQ9BZQ8 928 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC7A5P2Q9GIP4 190 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 PCBD2Q9H0N5 130 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 DDX47Q9H0S4 455 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CLMPQ9H6B4 373 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CUTCQ9NTM9 273 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 C20orf96Q9NUD7 363 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 UTP6Q9NYH9 597 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 TAS2R13Q9NYV9 303 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 GALPQ9UBC7 116 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 DHCR7Q9UBM7 475 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ASIC3Q9UHC3 531 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 NXT1Q9UKK6 140 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 TP53TG5Q9Y2B4 290 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 MRPS28Q9Y2Q9 187 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 TEX264Q9Y6I9 313 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 MYO7BQ6PIF6 2116 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 RELNP78509 3460 aa3.15□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGKV1-8A0A0C4DH67 115 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 A0A0J9YVX5 310 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 ANKRD61A6NGH8 418 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 ARGFXA6NJG6 315 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 USP27XA6NNY8 438 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 GOLGA8MH3BSY2 632 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 K7EM74 188 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 EIF3HO15372 352 aaKnown RBP eCLIP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 DPM1O60762 260 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SORBS2O94875 1100 aaKnown RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 TSPAN12O95859 305 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC16A8O95907 504 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 C8GP07360 202 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 FAM157CP0CG43 387 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 EZRP15311 586 aaKnown RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 MMP11P24347 488 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 PSMB5P28074 263 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 IMPA1P29218 277 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 RPA3P35244 121 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC26A3P40879 764 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 ELK3P41970 407 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 BDKRB1P46663 353 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 CCL11P51671 97 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 AP1S2P56377 157 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 VSX2P58304 361 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 GNG11P61952 73 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 CDKL1Q00532 357 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 DR1Q01658 176 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 HSPB3Q12988 150 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 FASTKQ14296 549 aaKnown RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 TMEM187Q14656 261 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 DEFB110Q30KQ9 67 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SYT14P1Q58G82 188 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 C6orf163Q5TEZ5 329 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 MLIPQ5VWP3 458 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 FRMPD2BQ6IN97 320 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 FAM45BPQ6NSW5 357 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 COX15Q7KZN9 410 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 CAMKMTQ7Z624 323 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 TMPRSS11BQ86T26 416 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC26A11Q86WA9 606 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 CPNE9Q8IYJ1 553 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 OTUD6BQ8N6M0 293 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF611Q8N823 705 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 TTC29Q8NA56 475 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 BBOF1Q8ND07 529 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 FDCSPQ8NFU4 85 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 KBTBD8Q8NFY9 601 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR4K1Q8NGD4 311 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 FAM45AQ8TCE6 357 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 MCOLN3Q8TDD5 553 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 PHLDA1Q8WV24 401 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SKA2Q8WVK7 121 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SSMEM1Q8WWF3 244 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 PNPLA2Q96AD5 504 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 TM4SF19Q96DZ7 209 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SNF8Q96H20 258 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 GMPPAQ96IJ6 420 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SFXN2Q96NB2 322 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 ASCL2Q99929 193 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 SELENOSQ9BQE4 189 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 DPH7Q9BTV6 452 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 NUDT9Q9BW91 350 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 PARVBQ9HBI1 364 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 POPDC3Q9HBV1 291 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 Q9N2K0 584 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 MRPS30Q9NP92 439 aaKnown RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 FBXO6Q9NRD1 293 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 IARS2Q9NSE4 1012 aaKnown RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 C14orf105Q9NVL8 296 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 P4HTMQ9NXG6 502 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 GPR83Q9NYM4 423 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 STOX2Q9P2F5 926 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 TAC3Q9UHF0 121 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 DAPK2Q9UIK4 370 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 TRMT6Q9UJA5 497 aaKnown RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 RUVBL2Q9Y230 463 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms