RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SIRT3Q9NTG7 399 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 FAF1Q9UNN5 650 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 A0A1W2PQD3 144 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 ELOA3DA6NLF2 546 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 BBIP1A8MTZ0 92 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 ABCD4O14678 606 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 KRT16P08779 473 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 EIF1P41567 113 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 CDKN2CP42773 168 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 OR3A2P47893 321 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 CDH11P55287 796 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 CBX1P83916 185 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 ZNF117Q03924 483 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 ELOA3BQ3SY89 546 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 C6orf120Q7Z4R8 191 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 MISPQ8IVT2 679 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 ATP6V1C2Q8NEY4 427 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 ELOA3Q8NG57 546 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 RP9Q8TA86 221 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 JADE3Q92613 823 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 GTF2H4Q92759 462 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 CMTM5Q96DZ9 223 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 PSD2Q9BQI7 771 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC35A5Q9BS91 424 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 CACNG6Q9BXT2 260 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 BCO1Q9HAY6 547 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 HHATLQ9HCP6 504 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 TMEM160Q9NX00 188 aa14.52□□□□□ -0.09
SHKBP1-215ENST00000597649 MALRD1Q5VYJ5 2156 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 A0A096LPI6 279 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 SCDO00767 359 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 KRT75O95678 551 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 COX4I1P13073 169 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 HPGDP15428 266 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 IGHV1-2P23083 117 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 ELK4P28324 431 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 LCN1P31025 176 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 NUDT6P53370 316 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 NFYCQ13952 458 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 NRF1Q16656 503 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 PAGE3Q5JUK9 113 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 AGAP6Q5VW22 663 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 ZCCHC12Q6PEW1 402 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 CLEC4FQ8N1N0 589 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 ZNF525Q8N782 197 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 POU5F2Q8N7G0 328 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 PCYOX1LQ8NBM8 494 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC35G5Q96KT7 338 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 C19orf24Q9BVV8 132 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC52A3Q9NQ40 469 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 FAIMQ9NVQ4 179 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 ICAM5Q9UMF0 924 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 CARD8Q9Y2G2 431 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 TENM1Q9UKZ4 2725 aa14.51□□□□□ -0.09
SHKBP1-215ENST00000597649 NPIPA5A0A0B4J1W7 369 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 A0A1W2PNR3 127 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 NPIPA7E9PJI5 369 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 MRASO14807 208 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 PGM3O95394 542 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 HMGN2P05204 90 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ALOX5P09917 674 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ZCCHC18P0CG32 403 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 NPIPA8P0DM63 369 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 IGHV4-31P0DP07 118 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 MATN1P21941 496 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 PRDX6P30041 224 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 TTKP33981 857 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ANXA11P50995 505 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 CASP9P55211 416 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 SPOCK1Q08629 439 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 LASP1Q14847 261 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 NDUFAF6Q330K2 333 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 KLHL26Q53HC5 615 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 COQ5Q5HYK3 327 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 TIMM23BQ5SRD1 257 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 CLEC2AQ6UVW9 174 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 DHDDSQ86SQ9 333 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC43A2Q8N370 569 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 PHOSPHO1Q8TCT1 267 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 GPR119Q8TDV5 335 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ADAMTS15Q8TE58 950 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ZFP90Q8TF47 636 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ADAD1Q96M93 576 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ZNF300Q96RE9 604 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 ACTRT3Q9BYD9 372 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 PAIP1Q9H074 479 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 GIN1Q9NXP7 522 aa14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-215ENST00000597649 PRKCAP17252 672 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 COX5AP20674 150 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 DSCR9P59020 149 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 RAC3P60763 192 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 REP15Q6BDI9 236 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 B3GLCTQ6Y288 498 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 RETREG3Q86VR2 466 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 TREML1Q86YW5 311 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 DPP10Q8N608 796 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 ZNF433Q8N7K0 673 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 COX18Q8N8Q8 333 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms