RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 EVPLLA8MZ36 301 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 ZNF814B7Z6K7 855 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 C5orf58C9J3I9 102 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 RAMP1O60894 148 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 IMPDH2P12268 514 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 UQCRBP14927 111 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 PSMB1P20618 241 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 EDNRAP25101 427 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 PDK3Q15120 406 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 FBXW10Q5XX13 1052 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 WBP2NLQ6ICG8 309 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 DHDDSQ86SQ9 333 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 COMTD1Q86VU5 262 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 DDIT4LQ96D03 193 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 ZC3HAV1LQ96H79 300 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 ANKRD27Q96NW4 1050 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 CGREF1Q99674 301 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 CCDC134Q9H6E4 229 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 ZNF226Q9NYT6 803 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 CORO2BQ9UQ03 480 aa16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 PRRC2AP48634 2157 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 TEP1Q99973 2627 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-202ENST00000593764 ZNF716A6NP11 495 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 FRS3O43559 492 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 DNPH1O43598 174 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 TROVE2P10155 538 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 LOXP28300 417 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 NTF4P34130 210 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 OR3A2P47893 321 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 OR2B6P58173 313 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 HOXC5Q00444 222 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 SF3A3Q12874 501 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 SELPLGQ14242 412 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 CXorf67Q86X51 503 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 PTOV1Q86YD1 416 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 CCDC103Q8IW40 242 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 CADM2Q8N3J6 435 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 NINJ1Q92982 152 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 SLC35B4Q969S0 331 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 ARMC7Q9H6L4 198 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 CCM2LQ9NUG4 571 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 PLEKHA6Q9Y2H5 1048 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 GPR52Q9Y2T5 361 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 ROS1P08922 2347 aa16.4■□□□□ 0.22
SHKBP1-202ENST00000593764 FBP2O00757 339 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 ANGPT2O15123 496 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 TPST1O60507 370 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 VIMP08670 466 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 PPP3CBP16298 524 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 FPR1P21462 350 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 CXCR1P25024 350 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 PRKAR1BP31321 381 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 ARFIP2P53365 341 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 SLC16A1P53985 500 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 COPZ1P61923 177 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 BNIP2Q12982 314 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 SCARB2Q14108 478 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 HSP90B2PQ58FF3 399 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 DHRS4L2Q6PKH6 230 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 SPNS3Q6ZMD2 512 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 C3orf49Q96BT1 292 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 ZHX1-C8orf76Q96EF9 292 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 POTEKPQ9BYX7 375 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 ACTR6Q9GZN1 396 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 OR10A4Q9H209 315 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 CACYBPQ9HB71 228 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 FANCFQ9NPI8 374 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 MED4Q9NPJ6 270 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 PRSS50Q9UI38 385 aa16.39■□□□□ 0.21
SHKBP1-202ENST00000593764 KLF4O43474 513 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 ADAP00813 363 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 SLC6A2P23975 617 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 MTPNP58546 118 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 SLC35A1P78382 337 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 TSC22D1Q15714 1073 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 SFRP5Q5T4F7 317 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 PAMR1Q6UXH9 720 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 GALNT5Q7Z7M9 940 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 ATG4DQ86TL0 474 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 PIGXQ8TBF5 258 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 HS3ST6Q96QI5 342 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 HDHD5Q9BXW7 423 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 SAR1AQ9NR31 198 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 VPS13CQ709C8 3753 aa16.38■□□□□ 0.21
SHKBP1-202ENST00000593764 LIPT2A6NK58 231 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 TMEM229AB2RXF0 380 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 EIF1BO60739 113 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 NPIPB7O75200 414 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 AQP1P29972 269 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 ART1P52961 327 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 PCBP3P57721 371 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 KLF10Q13118 480 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 NFYCQ13952 458 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 P2RY6Q15077 328 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 Q6ZT83 130 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 KRT73Q86Y46 540 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 HIPK4Q8NE63 616 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 STEAP2Q8NFT2 490 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms