RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 LYPD3O95274 346 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 MT-ND1P03886 318 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 HOXD4P09016 255 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-214ENST00000592186 TFPIP10646 304 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 DNAJA1P31689 397 aaKnown RBP9.62□□□□□ -0.87
SMAD4-214ENST00000592186 SPIBQ01892 262 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 RBPJQ06330 500 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 MFSD13AQ14CX5 517 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 SYT14P1Q58G82 188 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 POMZP3Q6PJE2 187 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 ZNF730Q6ZMV8 503 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 CHMP1BQ7LBR1 199 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 OR5M1Q8NGP8 315 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 ALPK1Q96QP1 1244 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 PRSS27Q9BQR3 290 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 OSBPL10Q9BXB5 764 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 DCLRE1BQ9H816 532 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 ASF1BQ9NVP2 202 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 RHCGQ9UBD6 479 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 SLC6A5Q9Y345 797 aa9.62□□□□□ -0.87
SMAD4-214ENST00000592186 SAMHD1Q9Y3Z3 626 aaKnown RBP9.62□□□□□ -0.87
SMAD4-214ENST00000592186 TNRC6AQ8NDV7 1962 aaKnown RBP9.62□□□□□ -0.87
SMAD4-214ENST00000592186 TRAV36DV7A0A075B6V5 113 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 A0A1B0GTH9 108 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 TMEM72A0PK05 275 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 AHRRA9YTQ3 701 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 SHISA8B8ZZ34 492 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 H3BNX3 289 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 DNPH1O43598 174 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 NPIPB7O75200 414 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 E2F6O75461 281 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 AHSA1O95433 338 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 MT-ATP6P00846 226 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 THY1P04216 161 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 ZNF708P17019 499 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 CCNA2P20248 432 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 TCEA1P23193 301 aaKnown RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 PTGS2P35354 604 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 LHX2P50458 406 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 TDGF1P3P51864 188 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 CARD18P57730 90 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 RPS3AP61247 264 aaKnown RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 CSNK2A1P68400 391 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 FOXK1P85037 733 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 CRYZQ08257 329 aaKnown RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 TMEM176BQ3YBM2 270 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 FGD3Q5JSP0 725 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 C1orf140Q5VVS0 124 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 PODNL1Q6PEZ8 512 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 MBOAT2Q6ZWT7 520 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 TSPYL5Q86VY4 417 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 NKAIN4Q8IVV8 208 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 ATP6V1C2Q8NEY4 427 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 OR52J3Q8NH60 311 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 MFSD8Q8NHS3 518 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 CPT1CQ8TCG5 803 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 SLC7A13Q8TCU3 470 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 KLHL15Q96M94 604 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 TSPAN10Q9H1Z9 355 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 VCX3BQ9H321 246 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 VCX3AQ9NNX9 186 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 MAN2C1Q9NTJ4 1040 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 C6orf203Q9P0P8 240 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-214ENST00000592186 TMEM5Q9Y2B1 443 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 LRRC42Q9Y546 428 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 LYVE1Q9Y5Y7 322 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 CACNA1GO43497 2377 aa9.61□□□□□ -0.87
SMAD4-214ENST00000592186 A0A087WUU8 490 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 SH3PXD2BA1X283 911 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 EIF1BO60739 113 aaKnown RBP9.6□□□□□ -0.87
SMAD4-214ENST00000592186 CCNB2O95067 398 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 PMS2P2O95744 297 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 BAG2O95816 211 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 HIST1H2ABP04908 130 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 GABRA1P14867 456 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 IL11P20809 199 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 FPR1P21462 350 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 SFTPDP35247 375 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 PTGER4P35408 488 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 IDUAP35475 653 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 LIMS1P48059 325 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 CTBP2P56545 445 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 CLDN18P56856 261 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 RAC3P60763 192 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 SLC35A1P78382 337 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 PRKCDQ05655 676 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 TAF11Q15544 211 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 MICAQ29983 383 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 ANKDD1AQ495B1 522 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 FAM69AQ5T7M9 428 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 GFRALQ6UXV0 394 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 TMPPEQ6ZT21 453 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 HIST3H2AQ7L7L0 130 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 HIPK1Q86Z02 1210 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 ZDHHC13Q8IUH4 622 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 SVOPLQ8N434 492 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 OR4C15Q8NGM1 316 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 ZPLD1Q8TCW7 415 aa9.6□□□□□ -0.87
SMAD4-214ENST00000592186 TMEM255BQ8WV15 326 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms