RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZNF524Q96C55 264 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 SLC35G5Q96KT7 338 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ADAM19Q9H013 955 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 POLE3Q9NRF9 147 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 PNPOQ9NVS9 261 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ICAM5Q9UMF0 924 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF724A8MTY0 619 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 E9PBE3 544 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 NDUFS8O00217 210 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 NUDT14O95848 222 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 TGFAP01135 160 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 S100A3P33764 101 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 PDLIM4P50479 330 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 CHRNEQ04844 493 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 ZNF141Q15928 474 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 CR1LQ2VPA4 569 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 BEND6Q5SZJ8 279 aaPredicted RBP15.2■□□□□ 0.02
RETREG3-210ENST00000590541 KLHL17Q6TDP4 642 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 C12orf54Q6X4T0 127 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 C16orf62Q7Z3J2 963 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 TRIML2Q8N7C3 387 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.2■□□□□ 0.02
RETREG3-210ENST00000590541 OR5D16Q8NGK9 328 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 PIMREGQ9BSJ6 248 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 SOX7Q9BT81 388 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 AIG1Q9NVV5 245 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 BTNL2Q9UIR0 455 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 KCNE3Q9Y6H6 103 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 PMF1-BGLAPU3KQ54 211 aa15.2■□□□□ 0.02
RETREG3-210ENST00000590541 M0R1B8 84 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 SDHDO14521 159 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 ZNF264O43296 627 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 PRKCAP17252 672 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 RNF144AP50876 292 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-210ENST00000590541 ANXA11P50995 505 aaKnown RBP15.19■□□□□ 0.02
RETREG3-210ENST00000590541 MAGOHP61326 146 aaKnown RBP15.19■□□□□ 0.02
RETREG3-210ENST00000590541 CHRNB3Q05901 458 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 GALNT5Q7Z7M9 940 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 ZNF100Q8IYN0 542 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 DEPDC4Q8N2C3 294 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 GLB1L3Q8NCI6 653 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-210ENST00000590541 OR5W2Q8NH69 310 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 TLCD1Q96CP7 247 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 NEURL3Q96EH8 262 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 MRGPRX4Q96LA9 322 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 CCDC115Q96NT0 180 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 TMBIM4Q9HC24 238 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 CARD8Q9Y2G2 431 aa15.19■□□□□ 0.02
RETREG3-210ENST00000590541 SERINC4A6NH21 518 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 KLF11O14901 512 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 IGHV3-9P01782 118 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 UBL4AP11441 157 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 BMP4P12644 408 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 SLC7A1P30825 629 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 APOBEC3AP31941 199 aaPredicted RBP15.18■□□□□ 0.02
RETREG3-210ENST00000590541 PHC1P78364 1004 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 SELENBP1Q13228 472 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 CBFBQ13951 182 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 MST1LQ2TV78 715 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 FAM174BQ3ZCQ3 159 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 SLC25A53Q5H9E4 307 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 SPANXN4Q5MJ08 99 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.18■□□□□ 0.02
RETREG3-210ENST00000590541 FBXW9Q5XUX1 488 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 SAXO2Q658L1 398 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 ZNF614Q8N883 585 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 GPR119Q8TDV5 335 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 FOXN4Q96NZ1 517 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 SORCS2Q96PQ0 1159 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 ZBTB18Q99592 522 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 C1QTNF6Q9BXI9 259 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 ZNF350Q9GZX5 532 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 LAT2Q9GZY6 243 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 OR51I1Q9H343 314 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 ATP23Q9Y6H3 246 aa15.18■□□□□ 0.02
RETREG3-210ENST00000590541 MEGF8Q7Z7M0 2845 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 NPIPA5A0A0B4J1W7 369 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 CIB4A0PJX0 185 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 NPIPA7E9PJI5 369 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 ETV2O00321 342 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-210ENST00000590541 H6PDO95479 791 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 CPSF4O95639 269 aaKnown RBP15.17■□□□□ 0.02
RETREG3-210ENST00000590541 NPIPA8P0DM63 369 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 IDO1P14902 403 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 CHI3L1P36222 383 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-210ENST00000590541 MAGEA8P43361 318 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 KHKP50053 298 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 FOXG1P55316 489 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-210ENST00000590541 RPS26P62854 115 aaKnown RBP15.17■□□□□ 0.02
RETREG3-210ENST00000590541 GPR68Q15743 365 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 SWI5Q1ZZU3 235 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 PDZK1Q5T2W1 519 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 EIF3MQ7L2H7 374 aaKnown RBP15.17■□□□□ 0.02
RETREG3-210ENST00000590541 ANKRD46Q86W74 232 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 XAGE5Q8WWM1 108 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 SLC35A5Q9BS91 424 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 SAP130Q9H0E3 1048 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 SERHL2Q9H4I8 314 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 MARCOQ9UEW3 520 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-210ENST00000590541 SLC35A3Q9Y2D2 325 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms