RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 C1orf21Q9H246 121 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 MMADHCQ9H3L0 296 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 MUC13Q9H3R2 512 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 FOLH1BQ9HBA9 442 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 LRTM1Q9HBL6 345 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SEPSECSQ9HD40 501 aaKnown RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 Q9N2J8 555 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 MID1IP1Q9NPA3 183 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 NRIP3Q9NQ35 241 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 PNPOQ9NVS9 261 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 FAM120CQ9NX05 1096 aaKnown RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 HEY2Q9UBP5 337 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CDC42EP3Q9UKI2 254 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 GRID1Q9ULK0 1009 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 RNF115Q9Y4L5 304 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 NSD1Q96L73 2696 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 HEATR5AQ86XA9 2040 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 FN1P02751 2386 aaKnown RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 EXPH5Q8NEV8 1989 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 LINC00854A0A1B0GVQ3 168 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CLOCKO15516 846 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 RIPK2O43353 540 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 FADS1O60427 444 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 SS18L1O75177 396 aaPredicted RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 SOX30O94993 753 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 PLAUP00749 431 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 PDYNP01213 254 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 FAM157CP0CG43 387 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 COL6A2P12110 1019 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 HPGDP15428 266 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF17P17021 662 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 TAC1P20366 129 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 PSMB1P20618 241 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 IL32P24001 234 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 LOXP28300 417 aaPredicted RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 HMOX2P30519 316 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 GAS1P54826 345 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CLDN20P56880 219 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CARD18P57730 90 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 B3GALT5-AS1P59052 145 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 GNG11P61952 73 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ACSM2AQ08AH3 577 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF155Q12901 538 aaPredicted RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CSTF3Q12996 717 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 MALLQ13021 153 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 STX5Q13190 355 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CAPRIN1Q14444 709 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 LTB4RQ15722 352 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ADRM1Q16186 407 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 VPS26BQ4G0F5 336 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 SPIN4Q56A73 249 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF628Q5EBL2 1059 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 TCHHL1Q5QJ38 904 aaPredicted RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CPTPQ5TA50 214 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 LGSNQ5TDP6 509 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 AGAP6Q5VW22 663 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ACSM2BQ68CK6 577 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ESPNLQ6ZVH7 1005 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 IKBIPQ70UQ0 350 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 PHC2Q8IXK0 858 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 C17orf53Q8N3J3 647 aaPredicted RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 C1orf52Q8N6N3 182 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CDYL2Q8N8U2 506 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 METTL6Q8TCB7 284 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 RNF138Q8WVD3 245 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 IGFBPL1Q8WX77 278 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CFHR4Q92496 578 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 KAT2AQ92830 837 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 EXOSC8Q96B26 276 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 MUCL1Q96DR8 90 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 AJUBAQ96IF1 538 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ADAD1Q96M93 576 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 VSTM2LQ96N03 204 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 NAPGQ99747 312 aaPredicted RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 TMEM204Q9BSN7 226 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 SLCO5A1Q9H2Y9 848 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 SLC35C2Q9NQQ7 365 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 DDX18Q9NVP1 670 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 FBXO34Q9NWN3 711 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 TAS2R3Q9NYW6 316 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 SELENONQ9NZV5 590 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 XPR1Q9UBH6 696 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 EXTL2Q9UBQ6 330 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 ZMAT5Q9UDW3 170 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 PCTPQ9UKL6 214 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 LIPT1Q9Y234 373 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 STK38LQ9Y2H1 464 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 WBP11Q9Y2W2 641 aaKnown RBP4.95□□□□□ -1.62
DNMT1-220ENST00000589351 JMJD1CQ15652 2540 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 CSPG4Q6UVK1 2322 aa4.95□□□□□ -1.62
DNMT1-220ENST00000589351 VPS13CQ709C8 3753 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 GJE1A6NN92 205 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 H0YC42 278 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 TP73O15350 636 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 PCDH7O60245 1069 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 AQP8O94778 261 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 SUPT7LO94864 414 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 ANGPTL1O95841 491 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 INHBAP08476 426 aa4.94□□□□□ -1.62
DNMT1-220ENST00000589351 IL3P08700 152 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms