RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 STARP49675 285 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 CSRP3P50461 194 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FOXL2P58012 376 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 BTN3A2P78410 334 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 EFNB1P98172 346 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ZNF33BQ06732 778 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SRSF1Q07955 248 aaKnown RBP eCLIP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PDZK1IP1Q13113 114 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ABRAXAS2Q15018 415 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 NSDHLQ15738 373 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 EXT1Q16394 746 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ABLIM2Q6H8Q1 611 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 KIRREL2Q6UWL6 708 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ISCA2Q86U28 154 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 KLHDC8AQ8IYD2 350 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PM20D2Q8IYS1 436 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SLC7A5P1Q8MH63 180 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SLC43A2Q8N370 569 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 UXS1Q8NBZ7 420 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 OR2L5Q8NG80 312 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 OR4K1Q8NGD4 311 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SLC2A12Q8TD20 617 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PPP4R1Q8TF05 950 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 DYDC1Q8WWB3 177 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SLC44A1Q8WWI5 657 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SLC35B4Q969S0 331 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PNPLA2Q96AD5 504 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ESAMQ96AP7 390 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 MIB2Q96AX9 1013 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 C8orf44Q96CB5 159 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 NXNL1Q96CM4 212 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 TM4SF19Q96DZ7 209 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 WDR77Q9BQA1 342 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SRSF8Q9BRL6 282 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FAM234AQ9H0X4 552 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 VCX2Q9H322 139 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 CLMPQ9H6B4 373 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 CLK4Q9HAZ1 481 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 VCX3AQ9NNX9 186 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 AGPAT4Q9NRZ5 378 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SLC22A11Q9NSA0 550 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FAM212BQ9NTI7 297 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FAM120CQ9NX05 1096 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 EMC3Q9P0I2 261 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PSMC3IPQ9P2W1 217 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 XPR1Q9UBH6 696 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 HEY2Q9UBP5 337 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 KCNN3Q9UGI6 736 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 IKZF3Q9UKT9 509 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 USP22Q9UPT9 525 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 B3GNT3Q9Y2A9 372 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 MRPS2Q9Y399 296 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PTPRQQ9UMZ3 2332 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 LOC102723996A0A087X1L8 192 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 A0A0G2JN53 185 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 LOC100506127A0A0U1RQW1 187 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 MBD3L5A6NJ08 208 aaPredicted RBP4.28□□□□□ -1.72
ZNF540-204ENST00000586792 ZNF716A6NP11 495 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 MAGEB17A8MXT2 336 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 K7EM74 188 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 TAPBPO15533 448 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 LRRTM2O43300 516 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 CHST10O43529 356 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 TLX2O43763 284 aaPredicted RBP4.28□□□□□ -1.72
ZNF540-204ENST00000586792 UGDHO60701 494 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 WISP3O95389 354 aaPredicted RBP4.28□□□□□ -1.72
ZNF540-204ENST00000586792 CLDN9O95484 217 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 ALDOAP04075 364 aaKnown RBP4.28□□□□□ -1.72
ZNF540-204ENST00000586792 SERPINA7P05543 415 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 YES1P07947 543 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 ZNF735P0CB33 412 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 CHN1P15882 459 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 ADRA2CP18825 462 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 ACHEP22303 614 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 LIPAP38571 399 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 CCNG1P51959 295 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 PLA2G16P53816 162 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 MLLT10P55197 1068 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 OR4D2P58180 307 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 OC90Q02509 493 aaPredicted RBP4.28□□□□□ -1.72
ZNF540-204ENST00000586792 STX4Q12846 297 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 MFAP5Q13361 173 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 SNTB2Q13425 540 aaKnown RBP4.28□□□□□ -1.72
ZNF540-204ENST00000586792 GTF2H2Q13888 395 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 AP5B1Q2VPB7 878 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 C18orf21Q32NC0 220 aaPredicted RBP4.28□□□□□ -1.72
ZNF540-204ENST00000586792 Q3ZCU0 254 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 TMEM35AQ53FP2 167 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 PLA1AQ53H76 456 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 SFT2D3Q587I9 215 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 TECRLQ5HYJ1 363 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 C6orf136Q5SQH8 315 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 C6orf163Q5TEZ5 329 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 LIPJQ5W064 366 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 GRHL2Q6ISB3 625 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 GTF2H2CQ6P1K8 395 aa4.28□□□□□ -1.72
ZNF540-204ENST00000586792 METTL2BQ6P1Q9 378 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms