RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 EMC2Q15006 297 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 ADPRMQ3LIE5 342 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CHRFAM7AQ494W8 412 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 SULT1C3Q6IMI6 304 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CENPPQ6IPU0 288 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 GOLGA7Q7Z5G4 137 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 TMEM135Q86UB9 458 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 LRRTM1Q86UE6 522 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 LUZP1Q86V48 1076 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CENPSQ8N2Z9 138 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF397Q8NF99 534 aaPredicted RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 OR4F5Q8NH21 305 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 SPPL2AQ8TCT8 520 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 MCHR2Q969V1 340 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 NCLNQ969V3 563 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CPB2Q96IY4 423 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CYP2S1Q96SQ9 504 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 NT5DC2Q9H857 520 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 NRN1Q9NPD7 142 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 DEPPQ9NTK1 212 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 ATXN10Q9UBB4 475 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 P2RX2Q9UBL9 471 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF490Q9ULM2 529 aaPredicted RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CHMP2BQ9UQN3 213 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 KIF3AQ9Y496 699 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 MRPS18BQ9Y676 258 aaKnown RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 U3KQV3 271 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 FREM1Q5H8C1 2179 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 TRGV8A0A0C4DH27 118 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 TRBV5-4A0A0C4DH59 114 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 A0A0J9YVX5 310 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 SLC9A3R1O14745 358 aaPredicted RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 RNF113AO15541 343 aaKnown RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 IDH3BO43837 385 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 OR9G9P0C7N8 305 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 KRT13P13646 458 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 GP9P14770 177 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 ACAA2P42765 397 aaKnown RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 SGSHP51688 502 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 NDUFV3P56181 108 aaKnown RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 TRA2BP62995 288 aaKnown RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 NOP14P78316 857 aaKnown RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 FKBP3Q00688 224 aaKnown RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 CALCOCO2Q13137 446 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 ITGB3BPQ13352 177 aaPredicted RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 KLHL22Q53GT1 634 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 MUC21Q5SSG8 566 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 PAMR1Q6UXH9 720 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 P4HA3Q7Z4N8 544 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF573Q86YE8 665 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 CHPT1Q8WUD6 406 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 RAB3CQ96E17 227 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 APOOQ9BUR5 198 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF416Q9BWM5 594 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 SP140LQ9H930 580 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 TXLNGQ9NUQ3 528 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 TUBGCP4Q9UGJ1 667 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF346Q9UL40 294 aaKnown RBP3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 FZR1Q9UM11 496 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 MGAT4AQ9UM21 535 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 FBXO7Q9Y3I1 522 aa3.97□□□□□ -1.77
SSX2IP-208ENST00000490476 MEX3AA1L020 520 aaKnown RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 PDXKO00764 312 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 TRAFD1O14545 582 aaPredicted RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 EI24O14681 340 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 ZBTB5O15062 677 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 CLDN3O15551 220 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 GSTT2P0CG29 244 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 GSTT2BP0CG30 244 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 CALCBP10092 127 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 CCL4P13236 92 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 HOXB6P17509 224 aaKnown RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 AXLP30530 894 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 MAT2AP31153 395 aaKnown RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 GSCP56915 257 aaPredicted RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 PMP22Q01453 160 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 OVGP1Q12889 678 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 ENPP2Q13822 863 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 FASTKQ14296 549 aaKnown RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 WDR43Q15061 677 aaKnown RBP eCLIP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 ZNF146Q15072 292 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 PARP6Q2NL67 630 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 MS4A18Q3C1V0 323 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 ARL6IP6Q8N6S5 226 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 Q8NBF4 154 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 OR4F17Q8NGA8 305 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 OR2T3Q8NH03 318 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 GIPC3Q8TF64 312 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 THRSPQ92748 146 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 OR4F4Q96R69 305 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 FICDQ9BVA6 458 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 ILKAPQ9H0C8 392 aaPredicted RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 CXCL16Q9H2A7 254 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 ALG9Q9H6U8 611 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 MOB1AQ9H8S9 216 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 STMN3Q9NZ72 180 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 THAP10Q9P2Z0 257 aaPredicted RBP3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 SEC14L4Q9UDX3 406 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms