RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 ZNF222Q9UK12 451 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 FBXL2Q9UKC9 423 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 PRAMEF25A6NGN4 478 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 SLC28A2O43868 658 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 TBX19O60806 448 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 HLA-DQB1P01920 261 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 RPS19P39019 145 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 KLHL22Q53GT1 634 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 TRMT12Q53H54 448 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 DGAT2L6Q6ZPD8 337 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 WFDC6Q9BQY6 131 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 RASSF1Q9NS23 344 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 KRT84Q9NSB2 600 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 TCRBV16S1A1N1A0A5B0 115 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 SUV39H1O43463 412 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 CHST10O43529 356 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 KLK3P07288 261 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 EPHA8P29322 1005 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 PPP2R1BP30154 601 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 EIF2S3P41091 472 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 EIF2S3LQ2VIR3 472 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 BICRALQ6AI39 1079 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 C19orf48Q6RUI8 117 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 BTN2A1Q7KYR7 527 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 ZER1Q7Z7L7 766 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 CYP4Z1Q86W10 505 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 EID2Q8N6I1 236 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 HGDQ93099 445 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 ASPNQ9BXN1 380 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 DHCR7Q9UBM7 475 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 SLC6A5Q9Y345 797 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 LYRM1O43325 122 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 FOXS1O43638 330 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 ARAFP10398 606 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 CKMT1AP12532 417 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 MPIP34949 423 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 RORAP35398 523 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 BTG1P62324 171 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 KCNJ10P78508 379 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 VEZF1Q14119 521 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 DMRTC2Q8IXT2 367 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 ENTHD1Q8IYW4 607 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 TTC29Q8NA56 475 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 OR4K14Q8NGD5 310 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 OR52J3Q8NH60 311 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 CREB3L1Q96BA8 519 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 MMABQ96EY8 250 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 LRRC46Q96FV0 321 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 SLC22A11Q9NSA0 550 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 RHCGQ9UBD6 479 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 SEC14L4Q9UDX3 406 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 PADI2Q9Y2J8 665 aa16.8■□□□□ 0.28
POLR2J3-205ENST00000489144 ASCC3Q8N3C0 2202 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 IQCMA0A1B0GVH7 501 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 TLCD2A6NGC4 264 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 TMEM150CB9EJG8 249 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 C5orf58C9J3I9 102 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 TERTO14746 1132 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 LPLP06858 475 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 HEXBP07686 556 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 TSFMP43897 325 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 MAN2A2P49641 1150 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 SMSP52788 366 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 STX4Q12846 297 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 EXOSC7Q15024 291 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 SNAPC1Q16533 368 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 MICBQ29980 383 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 NLRC3Q7RTR2 1065 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 LRRC25Q8N386 305 aaPredicted RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 NUP43Q8NFH3 380 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 TCTN2Q96GX1 697 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 DIRAS2Q96HU8 199 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 NKX6-2Q9C056 277 aaPredicted RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 ANKRD19PQ9H560 264 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 THUMPD1Q9NXG2 353 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 MYEF2Q9P2K5 600 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 NDOR1Q9UHB4 597 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 PSORS1C1Q9UIG5 152 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 CYR61O00622 381 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 ATG12O94817 140 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 FABP3P05413 133 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 CD1CP29017 333 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 SOX18P35713 384 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 RFC3P40938 356 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 OR1D4P47884 311 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 BTG2P78543 158 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 TRIQKQ629K1 86 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 SHFQ7M4L6 423 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 TSEN54Q7Z6J9 526 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 COMTD1Q86VU5 262 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 ARHGEF39Q8N4T4 335 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 PDE7BQ9NP56 450 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 ABCB9Q9NP78 766 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 PHF11Q9UIL8 331 aa16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 SAMHD1Q9Y3Z3 626 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-205ENST00000489144 A0A1B0GV90 55 aa16.78■□□□□ 0.28
POLR2J3-205ENST00000489144 HYKKA2RU49 373 aa16.78■□□□□ 0.28
POLR2J3-205ENST00000489144 TGFBR3LH3BV60 316 aa16.78■□□□□ 0.28
POLR2J3-205ENST00000489144 GPR37O15354 613 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms