RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 RAB40AQ8WXH6 277 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 GHSRQ92847 366 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 SLC25A38Q96DW6 304 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TBX5Q99593 518 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TSPAN10Q9H1Z9 355 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TUBA4BQ9H853 241 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 MOKQ9UQ07 419 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 RNF222A6NCQ9 220 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 F5H5T6 163 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 ADAMTS4O75173 837 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 IGLV3-27P01718 113 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 ACVR1BP36896 505 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 CNTN1Q12860 1018 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 LY6G6FQ5SQ64 297 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM244Q5VVB8 128 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 OR52W1Q6IF63 320 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 DNM1P46Q6ZS02 220 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 MEPCEQ7L2J0 689 aaKnown RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 SYT9Q86SS6 491 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 C1orf216Q8TAB5 229 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 PAQR8Q8TEZ7 354 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 CLCC1Q96S66 551 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 MRI1Q9BV20 369 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 FBXO44Q9H4M3 255 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 ZFYVE1Q9HBF4 777 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 NMRK2Q9NPI5 230 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 GFOD1Q9NXC2 390 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 CNIH4Q9P003 139 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 ZMIZ1Q9ULJ6 1067 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 AK6Q9Y3D8 172 aaKnown RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 METTL21EPA6NDL7 271 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 ANTXRLA6NF34 631 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 ACOD1A6NK06 481 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
HDAC1-206ENST00000476391 FARS2O95363 451 aaKnown RBP12.78□□□□□ -0.36
HDAC1-206ENST00000476391 PRG2P13727 222 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 PDHA2P29803 388 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 OMPP47874 163 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 PNLIPRP1P54315 467 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 LPCAT3Q6P1A2 487 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 COMTD1Q86VU5 262 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 GJD3Q8N144 294 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 CFAP52Q8N1V2 620 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 GPRC5AQ8NFJ5 357 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 OR2T33Q8NG76 320 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 RAB8BQ92930 207 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 WDR90Q96KV7 1748 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 CAMK1GQ96NX5 476 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM27Q9HBJ8 222 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 COMMD9Q9P000 198 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 FOXJ3Q9UPW0 622 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 SMIM35A0A1B0GVV1 85 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 F5H0A9 414 aaPredicted RBP12.78□□□□□ -0.36
HDAC1-206ENST00000476391 HMGN4O00479 90 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 SLC25A27O95847 323 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 INHAP05111 366 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 C1GALT1C1LP0DN25 315 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 DPP4P27487 766 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 TAS2R50P59544 299 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 ZNF239Q16600 458 aaKnown RBP12.78□□□□□ -0.36
HDAC1-206ENST00000476391 C4orf46Q504U0 113 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 VWA2Q5GFL6 755 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 PYY3Q5JQD4 70 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 TMPRSS11BQ86T26 416 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 SDR9C7Q8NEX9 313 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 OR10H4Q8NGA5 316 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 PIGXQ8TBF5 258 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 FAM46AQ96IP4 442 aaKnown RBP12.78□□□□□ -0.36
HDAC1-206ENST00000476391 MEGF10Q96KG7 1140 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 C4orf36Q96KX1 117 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 DERL3Q96Q80 235 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 MESP1Q9BRJ9 268 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 C2orf88Q9BSF0 95 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 SLC6A16Q9GZN6 736 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 APMAPQ9HDC9 416 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 TXNRD2Q9NNW7 524 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 NRIP3Q9NQ35 241 aa12.78□□□□□ -0.36
HDAC1-206ENST00000476391 OR2AT4A6NND4 320 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 SLC2A10O95528 541 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 PMS2P2O95744 297 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 ADH1CP00326 375 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 EPCAMP16422 314 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 DLSTP36957 453 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 F2RL1P55085 397 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 TMEM115Q12893 351 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-206ENST00000476391 RBM39Q14498 530 aaKnown RBP12.77□□□□□ -0.37
HDAC1-206ENST00000476391 PRSS53Q2L4Q9 553 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF383Q8NA42 475 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 OR13C5Q8NGS8 318 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 MALSU1Q96EH3 234 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 C1orf198Q9H425 327 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 CBY1Q9Y3M2 126 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 EMC8O43402 210 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms