RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CD81P60033 236 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 UBE2MP61081 183 aaKnown RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 RANP62826 216 aaKnown RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 IQCJQ1A5X6 159 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 ITPRIPL2Q3MIP1 535 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 LBHQ53QV2 105 aaPredicted RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 CD300LGQ6UXG3 332 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 FAM24BQ8N5W8 94 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 CCDC54Q8NEL0 328 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 OR9K2Q8NGE7 335 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 OR56B1Q8NGI3 324 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 DTD1Q8TEA8 209 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 CHAC2Q8WUX2 184 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 BRI3BPQ8WY22 251 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 AHCYL2Q96HN2 611 aaKnown RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 OR52D1Q9H346 318 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 TAC3Q9UHF0 121 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 ANKUB1A6NFN9 424 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 ZNF850A8MQ14 1090 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 HMSDA8MTL9 139 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 UGDHO60701 494 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 GPR32O75388 356 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 PPP1R3DO95685 299 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 PSMB6P28072 239 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 HTR1FP30939 366 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 PTTG1IPP53801 180 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 MEF2AQ02078 507 aaPredicted RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 TLE4Q04727 773 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 LCTLQ6UWM7 567 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 CPNE4Q96A23 557 aaPredicted RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 TOE1Q96GM8 510 aaKnown RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 CCDC74BQ96LY2 380 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 ATF6BQ99941 703 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 TESQ9UGI8 421 aaKnown RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 GOLT1BQ9Y3E0 138 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 ARID1BQ8NFD5 2236 aaPredicted RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 PIGBOS1A0A0B4J2F0 54 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 A0A0U1RQK1 487 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 SMIM35A0A1B0GVV1 85 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 MTMR11A4FU01 709 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 FAM227AF5H4B4 570 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 PLA2G10O15496 165 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 CYB5BO43169 146 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 HOXD4P09016 255 aaPredicted RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 SFTA3P0C7M3 94 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 MC3RP41968 323 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 RIDAP52758 137 aaKnown RBP9.64□□□□□ -0.87
LIN54-202ENST00000442461 SIRPAP78324 504 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 GUK1Q16774 197 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 ADIPOR2Q86V24 386 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 PLA2G15Q8NCC3 412 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 NUP43Q8NFH3 380 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 SMIM4Q8WVI0 70 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 CORO2AQ92828 525 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 PHYHIPLQ96FC7 376 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 HCAR1Q9BXC0 346 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 CACNG4Q9UBN1 327 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 V9GYH0 126 aa9.64□□□□□ -0.87
LIN54-202ENST00000442461 TERTO14746 1132 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 HRO43593 1189 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 JTBO76095 146 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 STK17BO94768 372 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 NDUFB2O95178 105 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 PCCBP05166 539 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 CD37P11049 281 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 ACP5P13686 325 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 PPM1AP35813 382 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 RPL23AP62750 156 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 HBA1P69905 142 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 ACSM1Q08AH1 577 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 ALKBH1Q13686 389 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 ZNF124Q15973 351 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 GSG1Q2KHT4 349 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 SFRP5Q5T4F7 317 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 GGNBP1Q5YKI7 109 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 GLDNQ6ZMI3 551 aaPredicted RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 HSD17B11Q8NBQ5 300 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 OR13C2Q8NGS9 318 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 ZCCHC10Q8TBK6 192 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.872e-6■■■■□ 21.7
LIN54-202ENST00000442461 POM121Q96HA1 1249 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 AKR1E2Q96JD6 320 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 RSRP1Q9BUV0 290 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 NMNAT2Q9BZQ4 307 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 CSAG2Q9Y5P2 127 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 RNF212BA8MTL3 300 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 B3GALT2O43825 422 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 ATP5A1P25705 553 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 MMP15P51511 669 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 MOGAT2Q3SYC2 334 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 FNDC3BQ53EP0 1204 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 KIAA0319Q5VV43 1072 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 MLIPQ5VWP3 458 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 ZNF550Q7Z398 422 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 SPICQ8N5J4 248 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 OR1S2Q8NGQ3 325 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 OR9A1PQ8NGU1 263 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms