RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 PSG5Q15238 335 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 KLHL38Q2WGJ6 581 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 HNRNPA1L2Q32P51 320 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 UNC50Q53HI1 259 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 CARD16Q5EG05 197 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ACSM2BQ68CK6 577 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 LRRC8EQ6NSJ5 796 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 LRRC28Q86X40 367 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 TCTE3Q8IZS6 198 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 HORMAD2Q8N7B1 307 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 LRRC75AQ8NAA5 344 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF114Q8NC26 417 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 GUCD1Q96NT3 240 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF385AQ96PM9 386 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 XPO6Q96QU8 1125 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF300Q96RE9 604 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 GANQ9H2C0 597 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC38A1Q9H2H9 487 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PPP4R1LQ9P1A2 415 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 NYAP2Q9P242 653 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 FBXL3Q9UKT7 428 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 SMIM28A0A1B0GU29 152 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PP2D1A8MPX8 630 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 FOXN1O15353 648 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 KCNN4O15554 427 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 SYT7O43581 403 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 EXTL3O43909 919 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 FKBP6O75344 327 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 CRLF1O75462 422 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 SUPT3HO75486 399 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 NFATC1O95644 943 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 POU1F1P28069 291 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PTGFRP43088 359 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 CAMK4Q16566 473 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PDK4Q16654 411 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PIK3CD-AS1Q5SR53 167 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR2G6Q5TZ20 316 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF782Q6ZMW2 699 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF429Q86V71 674 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ANGPTL5Q86XS5 388 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 NANOGP1Q8N7R0 232 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PNLDC1Q8NA58 520 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR52E5Q8NH55 327 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF420Q8TAQ5 688 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 SCFD1Q8WVM8 642 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 FCAMRQ8WWV6 532 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 GCDHQ92947 438 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 FAM84BQ96KN1 310 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 Q96MF0 132 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 NSMCE2Q96MF7 247 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 WDR77Q9BQA1 342 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 TAPBPLQ9BX59 468 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 RPF2Q9H7B2 306 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PCYOX1Q9UHG3 505 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 FBXO5Q9UKT4 447 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 MRPS33Q9Y291 106 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 B3GALT5Q9Y2C3 310 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 MEMO1Q9Y316 297 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 E7ESA3 106 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PSMD11O00231 422 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 GATCO43716 136 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 DUX1O43812 170 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 DFNA5O60443 496 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 IDH1O75874 414 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 BCL10O95999 233 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 APRTP07741 180 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 IGHV4-31P0DP07 118 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 CYLC1P35663 651 aaPredicted RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 PIGAP37287 484 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 MAGEA6P43360 314 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 XKP51811 444 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 GTF2BQ00403 316 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 NHLRC3Q5JS37 347 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 COA6Q5JTJ3 125 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 RNLSQ5VYX0 342 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 TWF2Q6IBS0 349 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 SPNS3Q6ZMD2 512 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF664Q8N3J9 261 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ARRDC1Q8N5I2 433 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 TERB1Q8NA31 727 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR1M1Q8NGA1 313 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR56A1Q8NGH5 318 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR52E4Q8NGH9 312 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR4D5Q8NGN0 318 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR13J1Q8NGT2 312 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR1F12Q8NHA8 337 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR10J5Q8NHC4 309 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 DYNC2LI1Q8TCX1 351 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 AKAP1Q92667 903 aaKnown RBP eCLIP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 CCDC127Q96BQ5 260 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 MTBPQ96DY7 904 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 DUX5Q96PT3 197 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 ATF6BQ99941 703 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 C2orf88Q9BSF0 95 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 CADM1Q9BY67 442 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 NLNQ9BYT8 704 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 LY9Q9HBG7 655 aa1.56□□□□□ -2.16
SMARCAD1-202ENST00000359052 RNF146Q9NTX7 359 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms