RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SLX4Q8IY92 1834 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 A6NIN4 97 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 LYRM1O43325 122 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 DOK2O60496 412 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 CDK1P06493 297 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 CX3CR1P49238 355 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 PPP5CP53041 499 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 USF2Q15853 346 aaPredicted RBP16.08■□□□□ 0.17
SHANK1-201ENST00000293441 COX15Q7KZN9 410 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 CNOT9Q92600 299 aaKnown RBP16.08■□□□□ 0.17
SHANK1-201ENST00000293441 KATNB1Q9BVA0 655 aa16.08■□□□□ 0.17
SHANK1-201ENST00000293441 TSPAN10Q9H1Z9 355 aaPredicted RBP16.08■□□□□ 0.17
SHANK1-201ENST00000293441 PPIL3Q9H2H8 161 aaKnown RBP16.08■□□□□ 0.17
SHANK1-201ENST00000293441 MBNL1Q9NR56 388 aaKnown RBP16.08■□□□□ 0.17
SHANK1-201ENST00000293441 PAQR5Q9NXK6 330 aaPredicted RBP16.08■□□□□ 0.17
SHANK1-201ENST00000293441 COL16A1Q07092 1604 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 UBFD1O14562 309 aaKnown RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 SC5DO75845 299 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 DPP4P27487 766 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 C17orf67Q0P5P2 114 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 GGTA1PQ4G0N0 100 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 AADACL4Q5VUY2 407 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 GDPD1Q8N9F7 314 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 ASB17Q8WXJ9 295 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 SPIN2AQ99865 258 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 SPIN2BQ9BPZ2 258 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 CSF1P09603 554 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 ARAFP10398 606 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 ENPP1P22413 925 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 PDE7AQ13946 482 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 LEXMQ3ZCV2 418 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 C14orf28Q4W4Y0 310 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 CD163Q86VB7 1156 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 FAM83FQ8NEG4 500 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 OR2T11Q8NH01 316 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 IFI44Q8TCB0 444 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 FOXRED1Q96CU9 486 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF14P17017 642 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 MSR1P21757 451 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 SLCO4C1Q6ZQN7 724 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 MISPQ8IVT2 679 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 SORCS2Q96PQ0 1159 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 C6orf106Q9H6K1 298 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 CACNG2Q9Y698 323 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 HCRTR1O43613 425 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 TPPPO94811 219 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 BCL2A1Q16548 175 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 SLC35D2Q76EJ3 337 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 UBE2ZQ9H832 354 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-201ENST00000293441 OBP2AQ9NY56 170 aa16.08■□□□□ 0.16
SHANK1-201ENST00000293441 NOTOA8MTQ0 251 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 B4GAT1O43505 415 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ITGAMP11215 1152 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ADPRHP54922 357 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 SLC35A1P78382 337 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF77Q15935 545 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 DPY19L2P1Q6NXN4 242 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ZADH2Q8N4Q0 377 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 SLC15A4Q8N697 577 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 TMEM178AQ8NBL3 297 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 SIMC1Q8NDZ2 872 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 C12orf49Q9H741 205 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 AGPAT4Q9NRZ5 378 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 RLIMQ9NVW2 624 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 K7ESM1 405 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 CA5AP35218 305 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 BCL6P41182 706 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 DUSP6Q16828 381 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 RAB39BQ96DA2 213 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 AMDHD1Q96NU7 426 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 F5H5P2 479 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 MT-CO2P00403 227 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 IL2RGP31785 369 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 DMWDQ09019 674 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF684Q5T5D7 378 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 KCTD11Q693B1 232 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 OR11L1Q8NGX0 322 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 SLC38A5Q8WUX1 472 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 PIGQQ9BRB3 760 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 PHF7Q9BWX1 381 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-201ENST00000293441 MS4A8Q9BY19 250 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 TMED7-TICAM2A0A0A6YYA0 188 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF136P52737 540 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 HBMQ6B0K9 141 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF585AQ6P3V2 769 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 C1orf198Q9H425 327 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 LRFN1Q9P244 771 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 TMED7Q9Y3B3 224 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 METTL15A6NJ78 407 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 TAS2R31P59538 309 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 TAS2R20P59543 309 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 DECR2Q9NUI1 292 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 IL37Q9NZH6 218 aa16.07■□□□□ 0.16
SHANK1-201ENST00000293441 ITGB4P16144 1822 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 FURINP09958 794 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 SNRPD2P62316 118 aaKnown RBP16.06■□□□□ 0.16
SHANK1-201ENST00000293441 FBXW12Q6X9E4 464 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 CCDC74AQ96AQ1 378 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms