RNA–Protein interactions for RNA: ENST00000608682.1

AP004247.3-201, humanhuman

BASIC

Gene AP004247.3, Length 624 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.3-201ENST00000608682 RPL34P49207 117 aaKnown RBP3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 TPMTP51580 245 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PRKXP51817 358 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 KLRC3Q07444 240 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 TGIF1Q15583 401 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 QRICH1Q2TAL8 776 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 GLYR1Q49A26 553 aaPredicted RBP3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 HSP90AB3PQ58FF7 597 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PRAMEF5Q5TYX0 476 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PRAMEF6Q5VXH4 476 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 LIPNQ5VXI9 398 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 RUFY3Q7L099 469 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 FGFRL1Q8N441 504 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 ALLCQ8N6M5 410 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 POM121L12Q8N7R1 296 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 FAM110BQ8TC76 370 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 RAPGEF5Q92565 580 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 MTMR9Q96QG7 549 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PLIN2Q99541 437 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 SLC35A5Q9BS91 424 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 NIPSNAP3BQ9BS92 247 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PARD6BQ9BYG5 372 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 CHIAQ9BZP6 476 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PKIBQ9C010 78 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 NAT10Q9H0A0 1025 aaKnown RBP3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PAK5Q9P286 719 aa3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 WARS2Q9UGM6 360 aaKnown RBP3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 ZNF142P52746 1687 aaPredicted RBP3.39□□□□□ -1.87
AP004247.3-201ENST00000608682 PNPLA6Q8IY17 1366 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ANKRD30BQ9BXX2 1392 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 KDM5CP41229 1560 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 DIP2CQ9Y2E4 1556 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 A0A1B0GUS0 222 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ZNF716A6NP11 495 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 GPAA1O43292 621 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 OR10H3O60404 316 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 AP2A1O95782 977 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ZNF735P0CB33 412 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 RNH1P13489 461 aaKnown RBP3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 VDAC1P21796 283 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 HOXD10P28358 340 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 STARP49675 285 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 CDH4P55283 916 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 RPL32P62910 135 aaKnown RBP3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 CXCL6P80162 114 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 MRPS11P82912 194 aaKnown RBP3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ASAH1Q13510 395 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 SLC15A2Q16348 729 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 TIMM50Q3ZCQ8 353 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 EIPR1Q53HC9 387 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ZNF772Q68DY9 489 aaPredicted RBP3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 CCDC137Q6PK04 289 aaKnown RBP3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 KDM7AQ6ZMT4 941 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 TGIF2LXQ8IUE1 241 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 OR2L13Q8N349 312 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 OR2L2Q8NH16 312 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 PAQR8Q8TEZ7 354 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 AGAP11Q8TF27 550 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 EFHD2Q96C19 240 aaPredicted RBP3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 APOL2Q9BQE5 337 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 CHRDL1Q9BU40 450 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 TRIM62Q9BVG3 475 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 CLEC5AQ9NY25 188 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ZNF581Q9P0T4 197 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 SPRR3Q9UBC9 169 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ZNF639Q9UID6 485 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 PHF11Q9UIL8 331 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 ERVW-1Q9UQF0 538 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 SHANK2Q9UPX8 1470 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 VWDEQ8N2E2 1590 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 NEURL4Q96JN8 1562 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 KANK1Q14678 1352 aa3.38□□□□□ -1.87
AP004247.3-201ENST00000608682 RNF17Q9BXT8 1623 aaKnown RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 CDK12Q9NYV4 1490 aaPredicted RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 A0A0U1RQS6 177 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 ZNF705EA8MWA4 302 aaPredicted RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 FAM220BPB1ANY3 271 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 B4DXG7 233 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 E7ESA3 106 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 E9PBE3 544 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 PRKAB2O43741 272 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 CXCL13O43927 109 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 HCN1O60741 890 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 RAMP3O60896 148 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 DUSP14O95147 198 aaKnown RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 ETS2P15036 469 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 SHC1P29353 583 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 YWHABP31946 246 aaKnown RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 CCR1P32246 355 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 QARSP47897 775 aaKnown RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 DAP3P51398 398 aaKnown RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 DUSP3P51452 185 aaPredicted RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 EFNA3P52797 238 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 SUCLG1P53597 346 aaKnown RBP3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 CD47Q08722 323 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 KLRB1Q12918 225 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 VGLL4Q14135 290 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 FCN2Q15485 313 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 SSX2Q16385 188 aa3.37□□□□□ -1.87
AP004247.3-201ENST00000608682 KLHL38Q2WGJ6 581 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms