RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 MIOSQ9NXC5 875 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 SLC9A2Q9UBY0 812 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF282Q9UDV7 671 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ZDHHC2Q9UIJ5 367 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TCFL5Q9UL49 500 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 FZD1Q9UP38 647 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 CITO14578 2027 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 EVPLQ92817 2033 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 hCG_1818297A0A087WSY0 165 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 NPIPB13A6NJU9 1138 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 BBIP1A8MTZ0 92 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 NPIPB4C9JG80 1138 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 GNGT2O14610 69 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 SOX15O60248 233 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TOXO94900 526 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 PRSS23O95084 383 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 NPSP0C0P6 89 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF14P17017 642 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 CXCL3P19876 107 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ECI1P42126 302 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 LHX1P48742 406 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 FHITP49789 147 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 GSK3BP49841 420 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 RORCP51449 518 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 EMP2P54851 167 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 DYNLT1P63172 113 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 MRPS11P82912 194 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 NAAAQ02083 359 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 SREBF2Q12772 1141 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TWF1Q12792 350 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 CRHR2Q13324 411 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 OLIG2Q13516 323 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 DPYSL3Q14195 570 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 SF3A2Q15428 464 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 SMN1Q16637 294 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 GUCA2BQ16661 112 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 SYTL3Q4VX76 610 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 RNASE10Q5GAN6 216 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ARL13AQ5H913 290 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 PPM1JQ5JR12 505 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 LAIR1Q6GTX8 287 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 LPCAT3Q6P1A2 487 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM220Q6QAJ8 160 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 DLK2Q6UY11 383 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF836Q6ZNA1 936 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TMPRSS11FQ6ZWK6 438 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 MED25Q71SY5 747 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 BHLHA15Q7RTS1 189 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TMPRSS7Q7RTY8 843 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 PHYKPLQ8IUZ5 450 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 FOXRED2Q8IWF2 684 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 RIMKLAQ8IXN7 391 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ADGRF3Q8IZF5 1079 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 HS3ST5Q8IZT8 346 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 C19orf47Q8N9M1 422 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 DTWD2Q8NBA8 298 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 BEND2Q8NDZ0 799 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 BEST4Q8NFU0 473 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 OR9K2Q8NGE7 335 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 OR51L1Q8NGJ5 315 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 OR2T35Q8NGX2 323 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 RHEBL1Q8TAI7 183 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 CLEC4DQ8WXI8 215 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 GAL3ST3Q96A11 431 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 FAF2Q96CS3 445 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 SCMH1Q96GD3 660 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF419Q96HQ0 510 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ITCHQ96J02 903 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 MRGPRX4Q96LA9 322 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM43Q9BTV4 400 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ADAT1Q9BUB4 502 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ASPNQ9BXN1 380 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 CDT1Q9H211 546 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF430Q9H8G1 570 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 LPAR2Q9HBW0 351 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 EXOSC4Q9NPD3 245 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 DLL4Q9NR61 685 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 LRIT1Q9P2V4 623 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 NDRG4Q9ULP0 352 aaKnown RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM184BQ9Y519 407 aaPredicted RBP4.38□□□□□ -1.71
LINC01109-201ENST00000603837 PLIN4Q96Q06 1357 aa4.38□□□□□ -1.71
LINC01109-201ENST00000603837 A0A0U1RQF3 1178 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 A0A1W2PPE3 182 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 SERPINE3A8MV23 424 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ISM1B1AKI9 464 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MID1O15344 667 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RP2O75695 350 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 AP2A1O95782 977 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 HLA-DQB1P01920 261 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MT-ND5P03915 603 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CD2P06729 351 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GSTM3P21266 225 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GLRA1P23415 457 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 S100A2P29034 98 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 PPP2R1BP30154 601 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 S100A11P31949 105 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CSF2RBP32927 897 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 LIMK2P53671 638 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms