RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 OR51I1Q9H343 314 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 SERHL2Q9H4I8 314 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 SLC17A7Q9P2U7 560 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 UPB1Q9UBR1 384 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 CHRNA9Q9UGM1 479 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 ZDHHC2Q9UIJ5 367 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 SLC25A15Q9Y619 301 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 ATP23Q9Y6H3 246 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 IGKV3D-15A0A087WSY6 115 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 GOLGA8QA0A0J9YX86 632 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 CENPVL1A0A0U1RR11 272 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 GOLGA8OA6NCC3 632 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 GOLGA8NF8WBI6 632 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 ANKRD28O15084 1053 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 DNAJA2O60884 412 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 PMS2P2O95744 297 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 FAM157CP0CG43 387 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 SLC25A16P16260 332 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 MAGEA8P43361 318 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 CLDN8P56748 225 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 OR2B6P58173 313 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 LOXL1Q08397 574 aaPredicted RBP9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 ATAD3BQ5T9A4 648 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 C9orf135Q5VTT2 229 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 CYB5R2Q6BCY4 276 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 ABLIM2Q6H8Q1 611 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 OR7E24Q6IFN5 339 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 C11orf71Q6IPW1 123 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 CCDC103Q8IW40 242 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 RIMKLAQ8IXN7 391 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF525Q8N782 197 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 OR52E4Q8NGH9 312 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 OR4A15Q8NGL6 344 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 PIGXQ8TBF5 258 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 TCP10LQ8TDR4 215 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 FAM168AQ92567 244 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 RAB8BQ92930 207 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 ARL5BQ96KC2 179 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 BEX2Q9BXY8 128 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF350Q9GZX5 532 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 MANSC1Q9H8J5 431 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 MKS1Q9NXB0 559 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 TAS2R16Q9NYV7 291 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 CDC42EP3Q9UKI2 254 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 SLC35A3Q9Y2D2 325 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 HDGFL3Q9Y3E1 203 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 WDR45Q9Y484 360 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 PMF1-BGLAPU3KQ54 211 aa9.29□□□□□ -0.92
CHMP2A-202ENST00000596708 A0A096LNT2 108 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 ELOA3DA6NLF2 546 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF716A6NP11 495 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 PHF1O43189 567 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 AGR2O95994 175 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 BMP4P12644 408 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 FKBP2P26885 142 aaKnown RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 PGM1P36871 562 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 SERPINB5P36952 375 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 FOXG1P55316 489 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 EMX2Q04743 252 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 CHRNB3Q05901 458 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 GABRA6Q16445 453 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 MAPK14Q16539 360 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 ELOA3BQ3SY89 546 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 GPAT3Q53EU6 434 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 TYW3Q6IPR3 259 aaKnown RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF544Q6NX49 715 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 TNFAIP8L2Q6P589 184 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 B3GLCTQ6Y288 498 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 GRINAQ7Z429 371 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 HMGN2P46Q86SG4 172 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 EIF1ADQ8N9N8 165 aaKnown RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 ELOA3Q8NG57 546 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 PPP1R36Q96LQ0 422 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 MUS81Q96NY9 551 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 NAA11Q9BSU3 229 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 INPP5KQ9BT40 448 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 CCDC106Q9BWC9 280 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 DPY30Q9C005 99 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 OR11A1Q9GZK7 315 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 FKRPQ9H9S5 495 aa9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 NOP53Q9NZM5 478 aaKnown RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 FBN1P35555 2871 aaKnown RBP9.28□□□□□ -0.92
CHMP2A-202ENST00000596708 RNASET2O00584 256 aaKnown RBP9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 DNPH1O43598 174 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 BCAS1O75363 584 aaPredicted RBP9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 ITGA5P08648 1049 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 UQCRC2P22695 453 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 APOBEC3AP31941 199 aaPredicted RBP9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 ARRB2P32121 409 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 NTF4P34130 210 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 IDH2P48735 452 aaKnown RBP9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 CLK1P49759 484 aaKnown RBP9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 KCNJ10P78508 379 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 LSM11P83369 360 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 HPCAP84074 193 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 VLDLRP98155 873 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 CASP12Q6UXS9 341 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 ANKRD46Q86W74 232 aa9.27□□□□□ -0.93
CHMP2A-202ENST00000596708 ADGRG3Q86Y34 549 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms