RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PAGE3Q5JUK9 113 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 PDSS1Q5T2R2 415 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 HBMQ6B0K9 141 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 ADAM5Q6NVV9 412 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 CMIPQ8IY22 773 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 PEX5LQ8IYB4 626 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 TMCO5AQ8N6Q1 288 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 AURKBQ96GD4 344 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 ZNF317Q96PQ6 595 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 GPC6Q9Y625 555 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 A0A0G2JPF8 293 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 A0A0J9YW62 118 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 PRAMEF27A3QJZ7 478 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 HNRNPCL2B2RXH8 293 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 HNRNPCL3B7ZW38 293 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 HNRNPCL1O60812 293 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 DBIP07108 87 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 TFPTP0C1Z6 253 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 HNRNPCL4P0DMR1 293 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 IL7RP16871 459 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 CCR4P51679 360 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 ATP5J2P56134 94 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 KCNJ10P78508 379 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 MAPRE2Q15555 327 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 ZSWIM7Q19AV6 140 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 PRAMEF8Q5VWM4 474 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 PRAMEF7Q5VXH5 474 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 CGB2Q6NT52 195 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 CBLN3Q6UW01 205 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 OLIG3Q7RTU3 272 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 WFDC8Q8IUA0 241 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 DPP10Q8N608 796 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 STEAP2Q8NFT2 490 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 POC1BQ8TC44 478 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 GPR119Q8TDV5 335 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 AKAP1Q92667 903 aaKnown RBP eCLIP15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 OSTF1Q92882 214 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 HDHD5Q9BXW7 423 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 SLC38A1Q9H2H9 487 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 KCNE5Q9UJ90 142 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 ZNF232Q9UNY5 417 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 GMEB1Q9Y692 573 aa15.61■□□□□ 0.09
SHKBP1-203ENST00000594298 AGAP5A6NIR3 686 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 C5orf58C9J3I9 102 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 OPN1LWP04000 364 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 BCHEP06276 602 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 CHRM4P08173 479 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 LINGO3P0C6S8 592 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 PABPC4LP0CB38 370 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 UBTFL6P0CB48 400 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 BMP2P12643 396 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 HOXB9P17482 250 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 PGCP20142 388 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 ELK4P28324 431 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 RNF144AP50876 292 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 CARD18P57730 90 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 RPS4XP62701 263 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 SF3A3Q12874 501 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 MAPK14Q16539 360 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 LILRA2Q8N149 483 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 GABRG1Q8N1C3 465 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 RNF128Q8TEB7 428 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 SLC38A5Q8WUX1 472 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 WDR60Q8WVS4 1066 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 TMEM234Q8WY98 164 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 ZG16BQ96DA0 208 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 MRGPRX4Q96LA9 322 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 KLHL15Q96M94 604 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 THUMPD3Q9BV44 507 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 ARMC7Q9H6L4 198 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 TMEM185BQ9H7F4 350 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 GP6Q9HCN6 339 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 A4GALTQ9NPC4 353 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 EXOSC3Q9NQT5 275 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 SLC25A37Q9NYZ2 338 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 VAPAQ9P0L0 249 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 SLAMF8Q9P0V8 285 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 ADAM21Q9UKJ8 722 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 PRDM4Q9UKN5 801 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 DSCAMO60469 2012 aa15.6■□□□□ 0.09
SHKBP1-203ENST00000594298 HIVEP2P31629 2446 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 GJE1A6NN92 205 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 OVOL3O00110 214 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 SLC22A2O15244 555 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 OIP5O43482 229 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 CCDC22O60826 627 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 GCM2O75603 506 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 PGM1P36871 562 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 KRTAP1-1Q07627 177 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 SKP2Q13309 424 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 TNK1Q13470 666 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 NFYCQ13952 458 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 LARS2Q15031 903 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 RNPS1Q15287 305 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 ETFDHQ16134 617 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 ZNF239Q16600 458 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 NDUFAF6Q330K2 333 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 TFAP2EQ6VUC0 442 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 DHDDSQ86SQ9 333 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms