RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 C5orf58C9J3I9 102 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 FRS3O43559 492 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 HNRNPCL1O60812 293 aaKnown RBP16.03■□□□□ 0.16
CIRBP-227ENST00000590188 YES1P07947 543 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 HNRNPCL4P0DMR1 293 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 POLR2HP52434 150 aaKnown RBP16.03■□□□□ 0.16
CIRBP-227ENST00000590188 OR2B6P58173 313 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 CSNK2A1P68400 391 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-227ENST00000590188 LARS2Q15031 903 aaKnown RBP16.03■□□□□ 0.16
CIRBP-227ENST00000590188 GCNT6Q5T4J0 391 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 TFAP2EQ6VUC0 442 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 BEND4Q6ZU67 534 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 CXorf67Q86X51 503 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-227ENST00000590188 SLC43A2Q8N370 569 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 IKZF5Q9H5V7 419 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 A4GALTQ9NPC4 353 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 THUMPD1Q9NXG2 353 aaKnown RBP16.03■□□□□ 0.16
CIRBP-227ENST00000590188 ZNF226Q9NYT6 803 aa16.03■□□□□ 0.16
CIRBP-227ENST00000590188 ING1Q9UK53 422 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-227ENST00000590188 DEFB108AA8MXU0 73 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 CYTIPO60759 359 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 PRG2P13727 222 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 UQCRBP14927 111 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 CRYGSP22914 178 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 DNASE1P24855 282 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 EDNRAP25101 427 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 SLC1A3P43003 542 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 HTR3AP46098 478 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 HOXC5Q00444 222 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 FADDQ13158 208 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 ZNF311Q5JNZ3 666 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 WFDC8Q8IUA0 241 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 BBS10Q8TAM1 723 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 PMM1Q92871 262 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 TMEM120AQ9BXJ8 343 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 ACTR6Q9GZN1 396 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 PLEKHF2Q9H8W4 249 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 PRSS50Q9UI38 385 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 CHST2Q9Y4C5 530 aa16.02■□□□□ 0.16
CIRBP-227ENST00000590188 OTOGQ6ZRI0 2925 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 A0A1W2PP18 115 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
CIRBP-227ENST00000590188 ZNF814B7Z6K7 855 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 RAMP1O60894 148 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 THBDP07204 575 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 BNIP2Q12982 314 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 TESK1Q15569 626 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 RNF220Q5VTB9 566 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 PAMR1Q6UXH9 720 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 DHDDSQ86SQ9 333 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 SERPINA11Q86U17 422 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 CCDC103Q8IW40 242 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 ZNF440Q8IYI8 595 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 DDIT4LQ96D03 193 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 ZHX1-C8orf76Q96EF9 292 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 HS3ST6Q96QI5 342 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 SPATA9Q9BWV2 254 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 RABEP2Q9H5N1 569 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 ZNF385DQ9H6B1 395 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 BCO1Q9HAY6 547 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 FANCFQ9NPI8 374 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 LEF1Q9UJU2 399 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-227ENST00000590188 ZNF232Q9UNY5 417 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 TRIM33Q9UPN9 1127 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 HDGFL3Q9Y3E1 203 aa16.01■□□□□ 0.15
CIRBP-227ENST00000590188 ANKRD17O75179 2603 aaKnown RBP16.01■□□□□ 0.15
CIRBP-227ENST00000590188 CCDC168Q8NDH2 2452 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 TRBV5-3A0A0A0MS03 114 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 PGM3O95394 542 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 PMS2P2O95744 297 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 ADAP00813 363 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 THBS1P07996 1170 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 ARAFP10398 606 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 IMPDH2P12268 514 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 BMP2P12643 396 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 ACAA2P42765 397 aaKnown RBP16■□□□□ 0.15
CIRBP-227ENST00000590188 PCYT1AP49585 367 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 COPZ1P61923 177 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 KEAP1Q14145 624 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 ABLIM2Q6H8Q1 611 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 MTDHQ86UE4 582 aaKnown RBP16■□□□□ 0.15
CIRBP-227ENST00000590188 NINJ1Q92982 152 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 CPPED1Q9BRF8 314 aaPredicted RBP16■□□□□ 0.15
CIRBP-227ENST00000590188 GP6Q9HCN6 339 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 BCL2L10Q9HD36 194 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 FGFR1OP2Q9NVK5 253 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 TMEM181Q9P2C4 612 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 IFT52Q9Y366 437 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 NDUFAF1Q9Y375 327 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 SPG11Q96JI7 2443 aa16■□□□□ 0.15
CIRBP-227ENST00000590188 AKAP6Q13023 2319 aa15.99■□□□□ 0.15
CIRBP-227ENST00000590188 EVPLLA8MZ36 301 aa15.99■□□□□ 0.15
CIRBP-227ENST00000590188 FAAHO00519 579 aa15.99■□□□□ 0.15
CIRBP-227ENST00000590188 ANGPT2O15123 496 aa15.99■□□□□ 0.15
CIRBP-227ENST00000590188 GCM2O75603 506 aaPredicted RBP15.99■□□□□ 0.15
CIRBP-227ENST00000590188 GOSR1O95249 250 aa15.99■□□□□ 0.15
CIRBP-227ENST00000590188 IGHV3-9P01782 118 aa15.99■□□□□ 0.15
CIRBP-227ENST00000590188 RAF1P04049 648 aa15.99■□□□□ 0.15
CIRBP-227ENST00000590188 PPIBP23284 216 aaKnown RBP15.99■□□□□ 0.15
CIRBP-227ENST00000590188 CXCR1P25024 350 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms