RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 C12orf49Q9H741 205 aa14.9□□□□□ -0.02
USB1-211ENST00000565662 TMEM181Q9P2C4 612 aa14.9□□□□□ -0.02
USB1-211ENST00000565662 GMEB1Q9Y692 573 aa14.9□□□□□ -0.02
USB1-211ENST00000565662 CDHR4A6H8M9 788 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 C5orf58C9J3I9 102 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 EFNA2O43921 213 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 OPN1LWP04000 364 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 BMP2P12643 396 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 SHC1P29353 583 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 RYKP34925 604 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 IDH2P48735 452 aaKnown RBP14.89□□□□□ -0.03
USB1-211ENST00000565662 SLC16A1P53985 500 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 CASP9P55211 416 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 SLC35A1P78382 337 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 EPS8Q12929 822 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 SQLEQ14534 574 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 SFRP5Q5T4F7 317 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 C5orf46Q6UWT4 87 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 DNAJC14Q6Y2X3 702 aaPredicted RBP14.89□□□□□ -0.03
USB1-211ENST00000565662 KRT73Q86Y46 540 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 GABRG1Q8N1C3 465 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 ANKFN1Q8N957 763 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 MAGEB18Q96M61 343 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 ESRP2Q9H6T0 727 aaKnown RBP14.89□□□□□ -0.03
USB1-211ENST00000565662 CTPS2Q9NRF8 586 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 PARPBPQ9NWS1 579 aa14.89□□□□□ -0.03
USB1-211ENST00000565662 CENPVL1A0A0U1RR11 272 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 A0A1W2PNR3 127 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 CLIC1O00299 241 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 SMAD9O15198 467 aaKnown RBP14.88□□□□□ -0.03
USB1-211ENST00000565662 BCHEP06276 602 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 GSNP06396 782 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 CD99P14209 185 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 PAX7P23759 505 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 POU4F3Q15319 338 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 ACKR1Q16570 336 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 LRIF1Q5T3J3 769 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 WBP2NLQ6ICG8 309 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 MAVSQ7Z434 540 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 ZNF100Q8IYN0 542 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 OR52P1PQ8NH57 321 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 PNPT1Q8TCS8 783 aaKnown RBP14.88□□□□□ -0.03
USB1-211ENST00000565662 NRGNQ92686 78 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 GTF2H4Q92759 462 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 SPDL1Q96EA4 605 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 SPATA9Q9BWV2 254 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 QRSL1Q9H0R6 528 aaKnown RBP14.88□□□□□ -0.03
USB1-211ENST00000565662 BCL2L10Q9HD36 194 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 A4GALTQ9NPC4 353 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 C6orf203Q9P0P8 240 aaPredicted RBP14.88□□□□□ -0.03
USB1-211ENST00000565662 SLC9A8Q9Y2E8 581 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 PRRC2AP48634 2157 aaKnown RBP14.88□□□□□ -0.03
USB1-211ENST00000565662 MED13LQ71F56 2210 aa14.88□□□□□ -0.03
USB1-211ENST00000565662 AKAP9Q99996 3911 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 FAM171A2A8MVW0 826 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 EVPLLA8MZ36 301 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 SMPD2O60906 423 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 GCM2O75603 506 aaPredicted RBP14.87□□□□□ -0.03
USB1-211ENST00000565662 GPIP06744 558 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 TFPTP0C1Z6 253 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 ETFAP13804 333 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 ETS2P15036 469 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 CD53P19397 219 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 CXCR1P25024 350 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 RNF144AP50876 292 aaPredicted RBP14.87□□□□□ -0.03
USB1-211ENST00000565662 MVDP53602 400 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 RGNQ15493 299 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 COX20Q5RI15 118 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 BLOC1S3Q6QNY0 202 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 PAQR6Q6TCH4 344 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 PRSS57Q6UWY2 283 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 ABHD12BQ7Z5M8 362 aaPredicted RBP14.87□□□□□ -0.03
USB1-211ENST00000565662 TSPEARQ8WU66 669 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 SLC38A5Q8WUX1 472 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 MUCL1Q96DR8 90 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 MARK4Q96L34 752 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 CCL19Q99731 98 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 KLHDC3Q9BQ90 382 aa14.87□□□□□ -0.03
USB1-211ENST00000565662 SF3B5Q9BWJ5 86 aaKnown RBP14.87□□□□□ -0.03
USB1-211ENST00000565662 ZNF443Q9Y2A4 671 aaPredicted RBP14.87□□□□□ -0.03
USB1-211ENST00000565662 NOSIPQ9Y314 301 aaKnown RBP14.87□□□□□ -0.03
USB1-211ENST00000565662 AKAP6Q13023 2319 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 TMED7-TICAM2A0A0A6YYA0 188 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.86□□□□□ -0.03
USB1-211ENST00000565662 PRAMEF27A3QJZ7 478 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 PRORSD1PA6NEY8 169 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 OR6C65A6NJZ3 312 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 C9JVG2 144 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 VAMP5O95183 116 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 COX5AP20674 150 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 IDUAP35475 653 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 IDH3AP50213 366 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 AQP5P55064 265 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 TTMPQ5BVD1 217 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 TIMM23BQ5SRD1 257 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 OR7E24Q6IFN5 339 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 CXorf67Q86X51 503 aaPredicted RBP14.86□□□□□ -0.03
USB1-211ENST00000565662 ADGRG3Q86Y34 549 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 OR9I1Q8NGQ6 314 aa14.86□□□□□ -0.03
USB1-211ENST00000565662 CNOT9Q92600 299 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms