RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 RPS6KA6Q9UK32 745 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PCTPQ9UKL6 214 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 SLC6A5Q9Y345 797 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TESMINQ9Y4I5 508 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PEX16Q9Y5Y5 336 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 FREM3P0C091 2139 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 ABCA1O95477 2261 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 A0A0G2JN53 185 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 C2orf92A0A1B0GVN3 265 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 OR6C76A6NM76 312 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 C4orf51C9J302 202 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 LOC110117498-PIK3R3F6TDL0 507 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 C16orf97H3BN30 126 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 J3QRK9 145 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CDC7O00311 574 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 LSM1O15116 133 aaKnown RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CD5LO43866 347 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 LDB3O75112 727 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TNFRSF21O75509 655 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CBR3O75828 277 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SIX3O95343 332 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CLIC3O95833 236 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 PTTG1O95997 202 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TFPTP0C1Z6 253 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 NCF1P14598 390 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 NCK1P16333 377 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 EFNA1P20827 205 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TLX1P31314 330 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 GALNSP34059 522 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 POLR2IP36954 125 aaKnown RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 OPRL1P41146 370 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CASP2P42575 452 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 MASP1P48740 699 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 ALDH9A1P49189 494 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 FOXA1P55317 472 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 ATP5J2P56134 94 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 NRG3P56975 720 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 IGLV3-21P80748 117 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TIAL1Q01085 375 aaKnown RBP eCLIP5.39□□□□□ -1.555e-6■■■■□ 21
CPSF7-219ENST00000539952 IL5RAQ01344 420 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 EMX1Q04741 257 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 LRRC74AQ0VAA2 488 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TRAF3Q13114 568 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SPCS2Q15005 226 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CLEC12BQ2HXU8 276 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 DPY19L1Q2PZI1 675 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 AP5B1Q2VPB7 878 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TIMM50Q3ZCQ8 353 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 RABL3Q5HYI8 236 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 C1QTNF12Q5T7M4 302 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 UBE2UQ5VVX9 321 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TIGD3Q6B0B8 471 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 HIST2H2AA3Q6FI13 130 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 OR2A2Q6IF42 318 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SHQ1Q6PI26 577 aaKnown RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TBPL2Q6SJ96 375 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CYP20A1Q6UW02 462 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SLCO4C1Q6ZQN7 724 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SLC16A12Q6ZSM3 486 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 Q6ZSR9 355 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 USP43Q70EL4 1123 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 ADGRE4PQ86SQ3 457 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TMPRSS11BQ86T26 416 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 C9orf40Q8IXQ3 194 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 KBTBD8Q8NFY9 601 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 OR10G3Q8NGC4 313 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 OR1J4Q8NGS1 313 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SPPL2AQ8TCT8 520 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 DYNC2LI1Q8TCX1 351 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 IGFBPL1Q8WX77 278 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 PIK3R3Q92569 461 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SLC38A4Q969I6 547 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 ZHX1-C8orf76Q96EF9 292 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 FAM120BQ96EK7 910 aaKnown RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 LINGO1Q96FE5 620 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 TMEM41AQ96HV5 264 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 METTL2AQ96IZ6 378 aaKnown RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 ITCHQ96J02 903 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 KCNC2Q96PR1 638 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CSF3RQ99062 836 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 PELOQ9BRX2 385 aaKnown RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 NTMT1Q9BV86 223 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CCDC90BQ9GZT6 254 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SIAEQ9HAT2 523 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 YAE1D1Q9NRH1 226 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 GPRC5BQ9NZH0 403 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CORO2BQ9UQ03 480 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 GRIP1Q9Y3R0 1128 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 CORINQ9Y5Q5 1042 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 SONP18583 2426 aaKnown RBP5.39□□□□□ -1.55
CPSF7-219ENST00000539952 USF3Q68DE3 2245 aa5.39□□□□□ -1.55
CPSF7-219ENST00000539952 A0A096LPI6 279 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 FAM172BPA6NC97 362 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 LRRC14BA6NHZ5 514 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 A8MV72 311 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 PTGES3LE9PB15 166 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 NPIPB8E9PQR5 432 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 RGS13O14921 159 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 EREGO14944 169 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 PHF1O43189 567 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms