RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 SLC26A7Q8TE54 656 aa16.31■□□□□ 0.2
VEGFA-222ENST00000520948 ASB5Q8WWX0 329 aa16.31■□□□□ 0.2
VEGFA-222ENST00000520948 FIG4Q92562 907 aa16.31■□□□□ 0.2
VEGFA-222ENST00000520948 RND1Q92730 232 aa16.31■□□□□ 0.2
VEGFA-222ENST00000520948 PHF3Q92576 2039 aaKnown RBP16.31■□□□□ 0.2
VEGFA-222ENST00000520948 INTS1Q8N201 2190 aaKnown RBP16.3■□□□□ 0.2
VEGFA-222ENST00000520948 H3BML4 177 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 GSTA4O15217 222 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 TOXO94900 526 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 GABRA1P14867 456 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 NCK1P16333 377 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 HTR3AP46098 478 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 CLDN20P56880 219 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 HOXC5Q00444 222 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 TFF3Q07654 80 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 PMPCAQ10713 525 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 NPTX1Q15818 432 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 CTU2Q2VPK5 515 aaKnown RBP16.3■□□□□ 0.2
VEGFA-222ENST00000520948 CYBRD1Q53TN4 286 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 WBP2NLQ6ICG8 309 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 ZNF585AQ6P3V2 769 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 CBLL1Q75N03 491 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 TMEM200AQ86VY9 491 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 LACC1Q8IV20 430 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 LILRB4Q8NHJ6 448 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 ADGRG7Q96K78 797 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 UCN2Q96RP3 112 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 GORASP2Q9H8Y8 452 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 KCNJ16Q9NPI9 418 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 CTPS2Q9NRF8 586 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 KLHL28Q9NXS3 571 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 EGFL7Q9UHF1 273 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 OSGIN1Q9UJX0 560 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 BAG5Q9UL15 447 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 FAM215AQ9Y5M1 114 aa16.3■□□□□ 0.2
VEGFA-222ENST00000520948 H0YC42 278 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 ADAMDEC1O15204 470 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 UQCRBP14927 111 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 TCN1P20061 433 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-222ENST00000520948 ACVR2AP27037 513 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 HTR2AP28223 471 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 SHC1P29353 583 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 TACR3P29371 465 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 MSX2P35548 267 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-222ENST00000520948 TPD52P55327 224 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-222ENST00000520948 NUP107P57740 925 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 MERTKQ12866 999 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 LRRC23Q53EV4 343 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-222ENST00000520948 LILRA2Q8N149 483 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 OR6T1Q8NGN1 323 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 TUBA1CQ9BQE3 449 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 PRR14Q9BWN1 585 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 STOML1Q9UBI4 398 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 PRPF19Q9UMS4 504 aaKnown RBP16.29■□□□□ 0.2
VEGFA-222ENST00000520948 CAMK2AQ9UQM7 478 aa16.29■□□□□ 0.2
VEGFA-222ENST00000520948 ARHGAP21Q5T5U3 1957 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 A0A0J9YW62 118 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 FIGNL2A6NMB9 653 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 FMO6PO60774 539 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 POLR2HP52434 150 aaKnown RBP16.28■□□□□ 0.2
VEGFA-222ENST00000520948 RGS8P57771 180 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-222ENST00000520948 SRYQ05066 204 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 SELENBP1Q13228 472 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 PGM2L1Q6PCE3 622 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 RBM45Q8IUH3 476 aaKnown RBP16.28■□□□□ 0.2
VEGFA-222ENST00000520948 OR52E4Q8NGH9 312 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 NRGNQ92686 78 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 C3orf49Q96BT1 292 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 ZNF559Q9BR84 538 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 BTBD10Q9BSF8 475 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 TRIM2Q9C040 744 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 PCDHAC1Q9H158 963 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 DCAF13Q9NV06 445 aaKnown RBP16.28■□□□□ 0.2
VEGFA-222ENST00000520948 ALKBH4Q9NXW9 302 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 TESQ9UGI8 421 aaKnown RBP16.28■□□□□ 0.2
VEGFA-222ENST00000520948 SLC13A4Q9UKG4 626 aa16.28■□□□□ 0.2
VEGFA-222ENST00000520948 SETD2Q9BYW2 2564 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-222ENST00000520948 TMED7-TICAM2A0A0A6YYA0 188 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 KDM4EB2RXH2 506 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-222ENST00000520948 M0R3H8 397 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 ATP5HO75947 161 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 SERPINA1P01009 418 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 OPN1LWP04000 364 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 FKBP2P26885 142 aaKnown RBP16.27■□□□□ 0.2
VEGFA-222ENST00000520948 MAP2K6P52564 334 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 ART1P52961 327 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 COPZ1P61923 177 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 SF3B4Q15427 424 aaKnown RBP eCLIP16.27■□□□□ 0.22e-10■■■□□ 18
VEGFA-222ENST00000520948 ACSF3Q4G176 576 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-222ENST00000520948 C1orf185Q5T7R7 199 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 NSUN5P2Q63ZY6 315 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 ESPNLQ6ZVH7 1005 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 SEM1Q6ZVN7 128 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 ATG4DQ86TL0 474 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-222ENST00000520948 DMRTC2Q8IXT2 367 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-222ENST00000520948 UBQLNLQ8IYU4 475 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 MEIOBQ8N635 442 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 OR10Q1Q8NGQ4 319 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 PROX1Q92786 737 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 TTYH2Q9BSA4 534 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms