RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CLIP4Q8N3C7 705 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 C11orf65Q8NCR3 313 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 OR6K3Q8NGY3 331 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 ROBO4Q8WZ75 1007 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SLC35B4Q969S0 331 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 REXO5Q96IC2 774 aaKnown RBP11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SPATA5L1Q9BVQ7 753 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 OR11A1Q9GZK7 315 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 OPN3Q9H1Y3 402 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-206ENST00000465877 ARMC7Q9H6L4 198 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 KAT8Q9H7Z6 458 aaKnown RBP11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 OSGIN1Q9UJX0 560 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 PROCRQ9UNN8 238 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 ZNF232Q9UNY5 417 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 TMED7Q9Y3B3 224 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 A8MXE2 369 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 SMAD9O15198 467 aaKnown RBP11.52□□□□□ -0.57
COL5A1-206ENST00000465877 FESP07332 822 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 KLK2P20151 261 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 TACR3P29371 465 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 CCKARP32238 428 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 LSP1P33241 339 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 ACAA2P42765 397 aaKnown RBP11.52□□□□□ -0.57
COL5A1-206ENST00000465877 GYS2P54840 703 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 CTBP2P56545 445 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 PCBP3P57721 371 aaKnown RBP11.52□□□□□ -0.57
COL5A1-206ENST00000465877 RAC3P60763 192 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 COPZ1P61923 177 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 CSNK2A1P68400 391 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-206ENST00000465877 TLE4Q04727 773 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 RBBP4Q09028 425 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 RNPS1Q15287 305 aaKnown RBP11.52□□□□□ -0.57
COL5A1-206ENST00000465877 WBP2NLQ6ICG8 309 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 DHRS4L2Q6PKH6 230 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 COMTD1Q86VU5 262 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 KIF18BQ86Y91 864 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 ZZZ3Q8IYH5 903 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 CADM2Q8N3J6 435 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 POU5F2Q8N7G0 328 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 LRRC58Q96CX6 371 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 DNAJA3Q96EY1 480 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 ARL5BQ96KC2 179 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF607Q96SK3 696 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF559Q9BR84 538 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 FAM107BQ9H098 131 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 GLRX2Q9NS18 164 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 KLHL13Q9P2N7 655 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 FREM1Q5H8C1 2179 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 POLQO75417 2590 aa11.52□□□□□ -0.57
COL5A1-206ENST00000465877 TMEM72A0PK05 275 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 SULT2B1O00204 365 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF208O43345 1280 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 CCDC22O60826 627 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 PMS2P2O95744 297 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 NPPAP01160 153 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 CGAP01215 116 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 TFPIP10646 304 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 CCNA2P20248 432 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 ENPP1P22413 925 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 PCGF2P35227 344 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 KIR2DL3P43628 341 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 NCALDP61601 193 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 GNGT1P63211 74 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 CYLC2Q14093 348 aaPredicted RBP11.51□□□□□ -0.57
COL5A1-206ENST00000465877 GLIPR1L2Q4G1C9 344 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 RABL3Q5HYI8 236 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 ABLIM2Q6H8Q1 611 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 NANOGP8Q6NSW7 305 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 TMPPEQ6ZT21 453 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 ADGRG3Q86Y34 549 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 ARMC8Q8IUR7 673 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 PCYOX1LQ8NBM8 494 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 OR8J3Q8NGG0 315 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 OR10A6Q8NH74 314 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 C3orf49Q96BT1 292 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 DDIT4LQ96D03 193 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 RCN3Q96D15 328 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 ELAC2Q9BQ52 826 aaKnown RBP11.51□□□□□ -0.57
COL5A1-206ENST00000465877 PSD2Q9BQI7 771 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 RSPO3Q9BXY4 272 aaPredicted RBP11.51□□□□□ -0.57
COL5A1-206ENST00000465877 NANOGQ9H9S0 305 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 CRIM1Q9NZV1 1036 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 KLHL9Q9P2J3 617 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 TESQ9UGI8 421 aaKnown RBP11.51□□□□□ -0.57
COL5A1-206ENST00000465877 HDGFL3Q9Y3E1 203 aa11.51□□□□□ -0.57
COL5A1-206ENST00000465877 LOC100653049A0A140TA62 436 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 ZC3H12DA2A288 527 aaKnown RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 PRORSD1PA6NEY8 169 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 TUBAL3A6NHL2 446 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 DNPH1O43598 174 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 SERPINB7O75635 380 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 KRT34O76011 436 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 OPN1SWP03999 348 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 DRD4P21917 467 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 CLK1P49759 484 aaKnown RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 RGS8P57771 180 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 HOXC5Q00444 222 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 DMTNQ08495 405 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms