RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RYKP34925 604 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 RPL3P39023 403 aaKnown RBP15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 DNAJB13P59910 316 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 TGFBR3Q03167 851 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 CCDC153Q494R4 210 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 OLIG3Q7RTU3 272 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 RFLNBQ8N5W9 214 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 ARL5BQ96KC2 179 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 KCNS3Q9BQ31 491 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 TUBB1Q9H4B7 451 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 SLC17A5Q9NRA2 495 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 CTPS2Q9NRF8 586 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 ACER3Q9NUN7 267 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 GPATCH2Q9NW75 528 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 OXSMQ9NWU1 459 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 MALT1Q9UDY8 824 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 MKLN1Q9UL63 735 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 MALRD1Q5VYJ5 2156 aa15.77■□□□□ 0.11
CHCHD3-203ENST00000448878 HEATR1Q9H583 2144 aaKnown RBP15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 KLF11O14901 512 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 WNT11O96014 354 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 ABHD2P08910 425 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 MATN1P21941 496 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 APOBEC1P41238 236 aaKnown RBP15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 CCT5P48643 541 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 PRPS1P60891 318 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 RPS26P62854 115 aaKnown RBP15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 SKP2Q13309 424 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 SWI5Q1ZZU3 235 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 VHLLQ6RSH7 139 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 SPATA19Q7Z5L4 167 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 ZNF540Q8NDQ6 660 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 PLA2G12AQ9BZM1 189 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 BPESC1Q9GZL8 116 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 ATAD3AQ9NVI7 634 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 PARPBPQ9NWS1 579 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 CHRNA9Q9UGM1 479 aa15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHCHD3-203ENST00000448878 LRP5LA4QPB2 252 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 ETV2O00321 342 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 RIPK2O43353 540 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 PLIN3O60664 434 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 FCMRO60667 390 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 PEX11AO75192 247 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 STX11O75558 287 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 PMS2P2O95744 297 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 ZNF23P17027 643 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 ITGA2P17301 1181 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 MAPK1P28482 360 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 SLC25A3Q00325 362 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 MST1LQ2TV78 715 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 BHLHB9Q6PI77 547 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 EIF3MQ7L2H7 374 aaKnown RBP15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 C17orf78Q8N4C9 275 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 NOA1Q8NC60 698 aaKnown RBP15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 MOAP1Q96BY2 351 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 PRPF18Q99633 342 aaKnown RBP15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 SOX7Q9BT81 388 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 OR11A1Q9GZK7 315 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 NMUR2Q9GZQ4 415 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 OCEL1Q9H607 264 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 SLC7A10Q9NS82 523 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 GIMAP2Q9UG22 337 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 TMEFF2Q9UIK5 374 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 HDGFL3Q9Y3E1 203 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 DNAJC15Q9Y5T4 150 aa15.75■□□□□ 0.11
CHCHD3-203ENST00000448878 CENPVL1A0A0U1RR11 272 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 DUXAA6NLW8 204 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 ANKRD28O15084 1053 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 WIPF1O43516 503 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 UGT2B17O75795 530 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 SERPINF1P36955 418 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 ZNF141Q15928 474 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 TSPO2Q5TGU0 170 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 TRMT10CQ7L0Y3 403 aaKnown RBP15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 C16orf62Q7Z3J2 963 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 SFXN5Q8TD22 340 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 C1orf50Q9BV19 199 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 ADAM19Q9H013 955 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 MYOZ1Q9NP98 299 aaPredicted RBP15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 KCNE5Q9UJ90 142 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 DCTN4Q9UJW0 460 aa15.74■□□□□ 0.11
CHCHD3-203ENST00000448878 SPRY1O43609 319 aaPredicted RBP15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 KRT33AO76009 404 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 SLU7O95391 586 aaKnown RBP15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 PTGR1Q14914 329 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 WHAMMP3Q1A5X7 153 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 KANK2Q63ZY3 851 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 C6orf120Q7Z4R8 191 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 C10orf107Q8IVU9 208 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 CLEC4FQ8N1N0 589 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 NATD1Q8N6N6 113 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 C1orf162Q8NEQ5 155 aaPredicted RBP15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 AGR3Q8TD06 166 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 MZB1Q8WU39 189 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 TWIST2Q8WVJ9 160 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 PPP3R2Q96LZ3 170 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 NAA11Q9BSU3 229 aaPredicted RBP15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 CCDC106Q9BWC9 280 aa15.73■□□□□ 0.11
CHCHD3-203ENST00000448878 TMEM181Q9P2C4 612 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms