RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	MAT2B	Q9NZL9	334 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	VSX1	Q9NZR4	365 aa	Predicted RBP	5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SELENON	Q9NZV5	590 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PTGFRN	Q9P2B2	879 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	BTNL2	Q9UIR0	455 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	VPS4A	Q9UN37	437 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	LIPT1	Q9Y234	373 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ZNF175	Q9Y473	711 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NUP210L	Q5VU65	1888 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MYO15A	Q9UKN7	3530 aa		5.68	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FER1L5	A0AVI2	2057 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TRAV34	A0A0B4J273	112 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	C2orf92	A0A1B0GVN3	265 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	RAB19	A4D1S5	217 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ANKRD28	O15084	1053 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SLC22A2	O15244	555 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	EMC8	O43402	210 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	AKR7A2	O43488	359 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ADAM20	O43506	726 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SHOX2	O60902	331 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NOS1AP	O75052	506 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SERPINB7	O75635	380 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	KRT36	O76013	467 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CLPX	O76031	633 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	RPP14	O95059	124 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	KRT75	O95678	551 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PTBP3	O95758	552 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	DDAH2	O95865	285 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SNRPB2	P08579	225 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	IFI6	P09912	130 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CT62	P0C5K7	136 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MED14OS	P0DP75	135 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ITGAM	P11215	1152 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CFP	P27918	469 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	IL12A	P29459	219 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PTGER1	P34995	402 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CHI3L1	P36222	383 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CAPG	P40121	348 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MC3R	P41968	323 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FRK	P42685	505 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ALDH3B1	P43353	468 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CDK9	P50750	372 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ACTR3	P61158	418 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	DUSP2	Q05923	314 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FUT7	Q11130	342 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ZNF155	Q12901	538 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	KLF10	Q13118	480 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	STX5	Q13190	355 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TP53BP2	Q13625	1128 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	DGCR6	Q14129	220 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	EXOSC7	Q15024	291 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TBR1	Q16650	682 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MEP1A	Q16819	746 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PRSS53	Q2L4Q9	553 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MPEG1	Q2M385	716 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	COL28A1	Q2UY09	1125 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	VPS26B	Q4G0F5	336 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TIGD2	Q4W5G0	525 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TRMT12	Q53H54	448 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ZNF628	Q5EBL2	1059 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CRB2	Q5IJ48	1285 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	RIPPLY2	Q5TAB7	128 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CPZ	Q66K79	652 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	DGAT2L6	Q6ZPD8	337 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ZNF621	Q6ZSS3	439 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FKBP9P1	Q75LS8	142 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PIGW	Q7Z7B1	504 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ANKRD46	Q86W74	232 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	RPS19BP1	Q86WX3	136 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CLECL1	Q8IZS7	167 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SIRT6	Q8N6T7	355 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NFAM1	Q8NET5	270 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	OR56A1	Q8NGH5	318 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	OR9I1	Q8NGQ6	314 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SUN3	Q8TAQ9	357 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SETD6	Q8TBK2	473 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	BRIX1	Q8TDN6	353 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ELP5	Q8TE02	316 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ELP4	Q96EB1	424 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TEX37	Q96LM6	180 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	LRRC37B	Q96QE4	947 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MESP1	Q9BRJ9	268 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NUDT9	Q9BW91	350 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CHID1	Q9BWS9	393 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NMUR2	Q9GZQ4	415 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SLC5A7	Q9GZV3	580 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	OR10A5	Q9H207	317 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CDCP1	Q9H5V8	836 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SAR1A	Q9NR31	198 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ZCCHC3	Q9NUD5	404 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TMEM160	Q9NX00	188 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NDE1	Q9NXR1	346 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	GPR83	Q9NYM4	423 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ENOPH1	Q9UHY7	261 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	LEF1	Q9UJU2	399 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TINAG	Q9UJW2	476 aa		5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MRTO4	Q9UKD2	239 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FAF1	Q9UNN5	650 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NDUFAF1	Q9Y375	327 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms