RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CIB4A0PJX0 185 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 TMEM72A0PK05 275 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 CFAP73A6NFT4 308 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 AGAP5A6NIR3 686 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 CCT8L1PA6NM43 557 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 ZNF724A8MTY0 619 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 INHBBP09529 407 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 UQCRBP14927 111 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 CXCR1P25024 350 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 EDNRAP25101 427 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 FKBP2P26885 142 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 TACR3P29371 465 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 MAGEA8P43361 318 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 HTR3AP46098 478 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 CLK1P49759 484 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 POLR2HP52434 150 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 TXNL4AP83876 142 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 GTDC1Q4AE62 458 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 MRPL2Q5T653 305 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 CLEC9AQ6UXN8 241 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 Q6ZT83 130 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 MAVSQ7Z434 540 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 BIVMQ86UB2 503 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 VRK2Q86Y07 508 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 CMIPQ8IY22 773 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 LRRC75A-AS1Q8N1F1 130 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 MIER2Q8N344 545 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 OIT3Q8WWZ8 545 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 PMM1Q92871 262 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 NEUROG1Q92886 237 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 VPS33AQ96AX1 596 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 DDIT4LQ96D03 193 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 MUCL1Q96DR8 90 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 MAELQ96JY0 434 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 ARL5BQ96KC2 179 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 NAA11Q9BSU3 229 aaPredicted RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 ESRP2Q9H6T0 727 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 TPT1P8Q9HAU6 139 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 BCO1Q9HAY6 547 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 CACYBPQ9HB71 228 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 EXOSC3Q9NQT5 275 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 DLL4Q9NR61 685 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 SLC6A13Q9NSD5 602 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 RLIMQ9NVW2 624 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 ZIM2Q9NZV7 527 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 EMC3Q9P0I2 261 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 TMEM181Q9P2C4 612 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 OSGIN1Q9UJX0 560 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 LAMP3Q9UQV4 416 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 NOSIPQ9Y314 301 aaKnown RBP8.23□□□□□ -1.09
NUP50-206ENST00000422489 HDGFL3Q9Y3E1 203 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 USH1CQ9Y6N9 552 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 SPG11Q96JI7 2443 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 DOCK7Q96N67 2140 aa8.23□□□□□ -1.09
NUP50-206ENST00000422489 AKAP9Q99996 3911 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 PRRC2AP48634 2157 aaKnown RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 F8P00451 2351 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 FAM234BA2RU67 622 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 TMEM247A6NEH6 219 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 DPRXA6NFQ7 191 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 H7C1Q1 480 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 GPR171O14626 319 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 HS3ST1O14792 307 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 ADAM11O75078 769 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 MRPL33O75394 65 aaKnown RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 PMS2P2O95744 297 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 BCHEP06276 602 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 TFPTP0C1Z6 253 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 GKN3PP0CG01 181 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 IMPDH2P12268 514 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 GGT1P19440 569 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 NCF2P19878 526 aaPredicted RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 IGHV1-2P23083 117 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 SLC1A3P43003 542 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 PTH2RP49190 550 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 DSTNP60981 165 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 STX1BP61266 288 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 COPZ1P61923 177 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 SLC35A1P78382 337 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 FAPQ12884 760 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 EPS8Q12929 822 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 RPS26P11Q5JNZ5 115 aaPredicted RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 NCMAPQ5T1S8 102 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 AGBL2Q5U5Z8 902 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 FBXW9Q5XUX1 488 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 AP1ARQ63HQ0 302 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 SLC2A7Q6PXP3 512 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 EPGNQ6UW88 154 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 ATG4DQ86TL0 474 aaPredicted RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 KRTAP1-3Q8IUG1 177 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 CADM2Q8N3J6 435 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 ZNF611Q8N823 705 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 FAM71CQ8NEG0 241 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 OR9I1Q8NGQ6 314 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 LILRB1Q8NHL6 650 aaPredicted RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 PIGXQ8TBF5 258 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 LRRC8CQ8TDW0 803 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 DYDC1Q8WWB3 177 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 APH1AQ96BI3 265 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms