RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 H7C1C5 153 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ALDOCP09972 364 aaKnown RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 HTR2AP28223 471 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 LCN6P62502 163 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 NDUFAF7Q7L592 441 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 OR4D6Q8NGJ1 314 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 HAVCR2Q8TDQ0 301 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ZFPM2Q8WW38 1151 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF587Q96SQ5 575 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 SPHK1Q9NYA1 384 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM265A0A087WTH1 108 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ATP1B3P54709 279 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 HSF5Q4G112 596 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 RSPRY1Q96DX4 576 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 DHRS4Q9BTZ2 278 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 OR51E2Q9H255 320 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 HHLA2Q9UM44 414 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF749O43361 778 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 DNAJB6O75190 326 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 ATP6V1G1O75348 118 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 RAB40BQ12829 278 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 ADGRG5Q8IZF4 528 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 WFDC5Q8TCV5 224 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 SDSLQ96GA7 329 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 MAOAP21397 527 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 SSTR4P31391 388 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 EXOSC6Q5RKV6 272 aaKnown RBP16.1■□□□□ 0.17
SHANK1-201ENST00000293441 PAPD4Q6PIY7 484 aaKnown RBP16.1■□□□□ 0.17
SHANK1-201ENST00000293441 RTN4RL1Q86UN2 441 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-201ENST00000293441 MED20Q9H944 212 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 A0A0G2JMP0 313 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 HSPB6O14558 160 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF780AO75290 641 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-201ENST00000293441 REEP5Q00765 189 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 RAB31Q13636 194 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 ESX1Q8N693 406 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 OR4M2Q8NGB6 313 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 OR4F15Q8NGB8 312 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 SLC41A2Q96JW4 573 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 PLCH1Q4KWH8 1693 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 A0A087WUU8 490 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 NFATC3Q12968 1075 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 GPR19Q15760 415 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM240Q5SV17 173 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 OR56B2PQ8NGI1 322 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 TSNAXQ99598 290 aaKnown RBP16.1■□□□□ 0.17
SHANK1-201ENST00000293441 PBX4Q9BYU1 374 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 V9GY05 133 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 ANKRD12Q6UB98 2062 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 MYO18AQ92614 2054 aaKnown RBP16.1■□□□□ 0.17
SHANK1-201ENST00000293441 LOC105369274A0A096LPK9 316 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 TLCD2A6NGC4 264 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 NUDT7P0C024 238 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 LIPCP11150 499 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 CD27P26842 260 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 OR4N4Q8N0Y3 316 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 HSD17B8Q92506 261 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 SLC29A1Q99808 456 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 EVA1AQ9H8M9 152 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 C1GALT1Q9NS00 363 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 SLAMF8Q9P0V8 285 aa16.1■□□□□ 0.17
SHANK1-201ENST00000293441 CD300LBA8K4G0 201 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 AKAIN1P0CW23 69 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM52BQ4KMG9 183 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 GTF2H4Q92759 462 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 PDXPQ96GD0 296 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 RPP30P78346 268 aaKnown RBP16.09■□□□□ 0.17
SHANK1-201ENST00000293441 INTS6Q9UL03 887 aaKnown RBP16.09■□□□□ 0.17
SHANK1-201ENST00000293441 TRBV4-1A0A0J9YWV2 114 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 CHRNB4P30926 498 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 CARD18P57730 90 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 RAB4BP61018 213 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF597Q96LX8 424 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ANKRD60Q9BZ19 345 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 CDCP1Q9H5V8 836 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 PADI1Q9ULC6 663 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 SERINC4A6NH21 518 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 TRIM64CA6NLI5 447 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 MED25Q71SY5 747 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ANKRD13BQ86YJ7 626 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 LILRA3Q8N6C8 439 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-201ENST00000293441 LCORQ96JN0 433 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-201ENST00000293441 BIRC8Q96P09 236 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF750Q32MQ0 723 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 PSMF1Q92530 271 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 SNAPC3Q92966 411 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ASB16Q96NS5 453 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 KCND3Q9UK17 655 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 NXT1Q9UKK6 140 aaKnown RBP16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ARGFXA6NJG6 315 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 H0YIV9 168 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF593O00488 134 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-201ENST00000293441 HPGDSO60760 199 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 SLC22A5O76082 557 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 SLC6A19Q695T7 634 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 ACBD4Q8NC06 268 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 PBDC1Q9BVG4 233 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 OLAHQ9NV23 265 aa16.09■□□□□ 0.17
SHANK1-201ENST00000293441 HS3ST3A1Q9Y663 406 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms