RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 SRXN1Q9BYN0 137 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 CLEC4MQ9H2X3 399 aaPredicted RBP11.28□□□□□ -0.6
USP8-219ENST00000625664 RASSF1Q9NS23 344 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 PROCRQ9UNN8 238 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
USP8-219ENST00000625664 CGAP01215 116 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 GUSBP08236 651 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 NR2F1P10589 423 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 PGCP20142 388 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 RYKP34925 604 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 CD79BP40259 229 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 KCNJ5P48544 419 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 SESN3P58005 492 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 SLC25A3Q00325 362 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 SELENBP1Q13228 472 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 ZNF239Q16600 458 aaKnown RBP11.28□□□□□ -0.6
USP8-219ENST00000625664 SLC25A53Q5H9E4 307 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 GMPPAQ96IJ6 420 aaPredicted RBP11.28□□□□□ -0.6
USP8-219ENST00000625664 ITCHQ96J02 903 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
USP8-219ENST00000625664 SLC38A1Q9H2H9 487 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 ZNF385DQ9H6B1 395 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 RMND5AQ9H871 391 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 COQ10BQ9H8M1 238 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 LIPT1Q9Y234 373 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 SLC35A3Q9Y2D2 325 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 EMC9Q9Y3B6 208 aa11.28□□□□□ -0.6
USP8-219ENST00000625664 CELSR1Q9NYQ6 3014 aa11.27□□□□□ -0.6
USP8-219ENST00000625664 LOC100653049A0A140TA62 436 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 A0A1W2PNR3 127 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 FAM234BA2RU67 622 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 FAM221AA4D161 298 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 SH3D21A4FU49 640 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 GJE1A6NN92 205 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 KRT34O76011 436 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 CD8BP10966 210 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 COX4I1P13073 169 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 ETFAP13804 333 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 POU2F1P14859 743 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 SLC7A1P30825 629 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 CCKARP32238 428 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 CRATP43155 626 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 KCNJ10P78508 379 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 TXNL4AP83876 142 aaKnown RBP11.27□□□□□ -0.61
USP8-219ENST00000625664 MXRA7P84157 204 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 PLAURQ03405 335 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 MERTKQ12866 999 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 DAZAP2Q15038 168 aaPredicted RBP11.27□□□□□ -0.61
USP8-219ENST00000625664 POU4F3Q15319 338 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 EXOC3L2Q2M3D2 409 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 LRRC74BQ6ZQY2 392 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 MSANTD1Q6ZTZ1 278 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 ZNF563Q8TA94 476 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 ABHD3Q8WU67 409 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 ST8SIA1Q92185 356 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 CNOT9Q92600 299 aaKnown RBP11.27□□□□□ -0.61
USP8-219ENST00000625664 THTPAQ9BU02 230 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 LIME1Q9H400 295 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 TPT1P8Q9HAU6 139 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 RNPEPL1Q9HAU8 725 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 TIGARQ9NQ88 270 aa11.27□□□□□ -0.61
USP8-219ENST00000625664 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.27□□□□□ -0.61
USP8-219ENST00000625664 ETV2O00321 342 aaPredicted RBP11.26□□□□□ -0.61
USP8-219ENST00000625664 NR5A2O00482 541 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 DNAJA2O60884 412 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
USP8-219ENST00000625664 KRT36O76013 467 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 ZCCHC18P0CG32 403 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 DNAJA1P31689 397 aaKnown RBP11.26□□□□□ -0.61
USP8-219ENST00000625664 MVDP53602 400 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 METTL21CQ5VZV1 264 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 AP1ARQ63HQ0 302 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 C3orf33Q6P1S2 294 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 SLC2A7Q6PXP3 512 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 PLEKHM3Q6ZWE6 761 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 LSRQ86X29 649 aaPredicted RBP11.26□□□□□ -0.61
USP8-219ENST00000625664 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 OR6K3Q8NGY3 331 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 OIT3Q8WWZ8 545 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 TMEM234Q8WY98 164 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 GTF2H4Q92759 462 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 CPNE4Q96A23 557 aaPredicted RBP11.26□□□□□ -0.61
USP8-219ENST00000625664 REXO5Q96IC2 774 aaKnown RBP11.26□□□□□ -0.61
USP8-219ENST00000625664 DACH2Q96NX9 599 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 OR5B2Q96R09 309 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 SLC39A3Q9BRY0 314 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 CCDC28BQ9BUN5 200 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 MMADHCQ9H3L0 296 aaPredicted RBP11.26□□□□□ -0.61
USP8-219ENST00000625664 C12orf49Q9H741 205 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 ACER3Q9NUN7 267 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 KLHL28Q9NXS3 571 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 F8P00451 2351 aa11.26□□□□□ -0.61
USP8-219ENST00000625664 IGHV3-15A0A0B4J1V0 119 aa11.25□□□□□ -0.61
USP8-219ENST00000625664 AGAP5A6NIR3 686 aa11.25□□□□□ -0.61
USP8-219ENST00000625664 CASKO14936 926 aa11.25□□□□□ -0.61
USP8-219ENST00000625664 ADAM11O75078 769 aa11.25□□□□□ -0.61
USP8-219ENST00000625664 IL7RP16871 459 aa11.25□□□□□ -0.61
USP8-219ENST00000625664 AGTR1P30556 359 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms