RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZNF468Q5VIY5 522 aaPredicted RBP18.93■□□□□ 0.62
PNKP-203ENST00000593946 NTNG2Q96CW9 530 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 NXPE2Q96DL1 559 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 DPH1Q9BZG8 443 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 SLC19A3Q9BZV2 496 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 PPP4R1LQ9P1A2 415 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 TRABD2BA6NFA1 517 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 ELOA3DA6NLF2 546 aaPredicted RBP18.92■□□□□ 0.62
PNKP-203ENST00000593946 EIF4E1BA6NMX2 242 aaKnown RBP18.92■□□□□ 0.62
PNKP-203ENST00000593946 MSX1P28360 303 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 TACR3P29371 465 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 ELOA3BQ3SY89 546 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 TMEM236Q5W0B7 351 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 CDK20Q8IZL9 346 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 ZNF786Q8N393 782 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 ELOA3Q8NG57 546 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 SGCZQ96LD1 299 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 TMEM43Q9BTV4 400 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 EGLN3Q9H6Z9 239 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 HHATLQ9HCP6 504 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 TAS2R10Q9NYW0 307 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 MYRFQ9Y2G1 1151 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 CELSR3Q9NYQ7 3312 aa18.92■□□□□ 0.62
PNKP-203ENST00000593946 IGKV1D-42A0A075B6H8 117 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 CCL3P10147 92 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 GP1BBP13224 206 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ELK4P28324 431 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 SLC30A6Q6NXT4 461 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ZNF620Q6ZNG0 422 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 P3H2Q8IVL5 708 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ENTHD1Q8IYW4 607 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 CLDN22Q8N7P3 220 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 FAM81AQ8TBF8 368 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 PLA2G12AQ9BZM1 189 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 IL20Q9NYY1 176 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 MED11Q9P086 117 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 OSGIN1Q9UJX0 560 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ENO4A6NNW6 628 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 IGF2P01344 180 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 CRYZQ08257 329 aaKnown RBP18.91■□□□□ 0.62
PNKP-203ENST00000593946 SRSF6Q13247 344 aaKnown RBP18.91■□□□□ 0.62
PNKP-203ENST00000593946 MAD2L1BPQ15013 274 aaPredicted RBP18.91■□□□□ 0.62
PNKP-203ENST00000593946 TBC1D25Q3MII6 688 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ATP1A1-AS1Q5TC04 95 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 PRAMEF20Q5VT98 475 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 SLX4IPQ5VYV7 408 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 SLC22A10Q63ZE4 541 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 LAIR2Q6ISS4 152 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 BEST3Q8N1M1 668 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 CLEC1AQ8NC01 280 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ST8SIA1Q92185 356 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ANGPTL4Q9BY76 406 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 LHPPQ9H008 270 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 PROK2Q9HC23 129 aa18.91■□□□□ 0.62
PNKP-203ENST00000593946 ASPMQ8IZT6 3477 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 UNC119BA6NIH7 251 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 DLX5P56178 289 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 CDK5Q00535 292 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 CLN3Q13286 438 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 CDK5R2Q13319 367 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 KCTD21Q4G0X4 260 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 C6orf141Q5SZD1 244 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 BROXQ5VW32 411 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 C12orf73Q69YU5 71 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 RTL4Q6ZR62 310 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 GRINAQ7Z429 371 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 GPALPP1Q8IXQ4 340 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 DEPDC4Q8N2C3 294 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 OR8D4Q8NGM9 314 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 CNIH3Q8TBE1 160 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 TMEM234Q8WY98 164 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 HDAC2Q92769 488 aaKnown RBP18.9■□□□□ 0.62
PNKP-203ENST00000593946 UBE2FQ969M7 185 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 YTHDF1Q9BYJ9 559 aaKnown RBP18.9■□□□□ 0.62
PNKP-203ENST00000593946 TEKT2Q9UIF3 430 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 KLK13Q9UKR3 277 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 RNF6Q9Y252 685 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 CDH10Q9Y6N8 788 aa18.9■□□□□ 0.62
PNKP-203ENST00000593946 HTR3EA5X5Y0 456 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 ANKRD33BA6NCL7 494 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 WISP1O95388 367 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 FUT1P19526 365 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 ITGA3P26006 1051 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 GIPRP48546 466 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 HLCSP50747 726 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 POLR2HP52434 150 aaKnown RBP18.89■□□□□ 0.61
PNKP-203ENST00000593946 CDC42P60953 191 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 EGR4Q05215 589 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 CYP4Z2PQ8N1L4 340 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 FADS6Q8N9I5 356 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 WDSUB1Q8N9V3 476 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 TEX47Q8TBZ9 253 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 THAP4Q8WY91 577 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 OSTF1Q92882 214 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 SLC25A19Q9HC21 320 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 WDR70Q9NW82 654 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 PCDHGB6Q9Y5F9 930 aa18.89■□□□□ 0.61
PNKP-203ENST00000593946 TRIM64A6NGJ6 449 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 EFCAB9A8MZ26 197 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 ETV2O00321 342 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms