RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 ERICH4A6NGS2 130 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 AQP12BA6NM10 295 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 EFNA2O43921 213 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 SEMG1P04279 462 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 ABOP16442 354 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 CCNA2P20248 432 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 CXCR1P25024 350 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 LHX2P50458 406 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 SELENBP1Q13228 472 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 ALG10BQ5I7T1 473 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 ZNF613Q6PF04 617 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 SPATA24Q86W54 205 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 AQP12AQ8IXF9 295 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 LILRA2Q8N149 483 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 RNF217Q8TC41 542 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 ADAMTS16Q8TE57 1224 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 PHF10Q8WUB8 498 aaKnown RBP13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 DNAJA4Q8WW22 397 aaPredicted RBP13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 POP5Q969H6 163 aaKnown RBP13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 SLC47A1Q96FL8 570 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 RAB3IPQ96QF0 476 aaPredicted RBP13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 SEPHS2Q99611 448 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 STOML1Q9UBI4 398 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 CHRNA9Q9UGM1 479 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
RPRD1A-208ENST00000589050 NCKAP5O14513 1909 aa13.96□□□□□ -0.18
RPRD1A-208ENST00000589050 NINQ8N4C6 2090 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 TRAPPC13A5PLN9 417 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 hCG_2039718K7EN88 272 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 BCKDKO14874 412 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 SEC14L5O43304 696 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 OPN1LWP04000 364 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 SFTPDP35247 375 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 YAP1P46937 504 aaKnown RBP13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 ERFP50548 548 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 CDH12P55289 794 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 CLDN18P56856 261 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 TAS2R41P59536 307 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 RAC1P63000 192 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 SRYQ05066 204 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 PIN1Q13526 163 aaPredicted RBP13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 IGFBP7Q16270 282 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 C3AR1Q16581 482 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 WLSQ5T9L3 541 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 C3orf33Q6P1S2 294 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 ULK3Q6PHR2 472 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 ATG4DQ86TL0 474 aaPredicted RBP13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 TSPYL5Q86VY4 417 aaPredicted RBP13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 ADGRG3Q86Y34 549 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 UBQLNLQ8IYU4 475 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 OR5M9Q8NGP3 310 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 FAM57AQ8TBR7 257 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 RELTQ969Z4 430 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 POLR2J2Q9GZM3 115 aaKnown RBP13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 POLR2J3Q9H1A7 115 aaKnown RBP13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 CAMK2AQ9UQM7 478 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 SPIN1Q9Y657 262 aaPredicted RBP13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 ENPP4Q9Y6X5 453 aa13.95□□□□□ -0.18
RPRD1A-208ENST00000589050 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 ELOA3DA6NLF2 546 aaPredicted RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 GJE1A6NN92 205 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 J3KTA2 159 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 SLC19A2O60779 497 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 SEMA7AO75326 666 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 OR5F1O95221 314 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 FABP3P05413 133 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 TPOP07202 933 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 PNMTP11086 282 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 NQO1P15559 274 aaKnown RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 ZNF708P17019 499 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 SHC1P29353 583 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 CLDN20P56880 219 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 VLDLRP98155 873 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 CHRNB3Q05901 458 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 MRPL49Q13405 166 aaKnown RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 BCL2A1Q16548 175 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 ELOA3BQ3SY89 546 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 FAM98BQ52LJ0 330 aaKnown RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 GDF7Q7Z4P5 450 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 TSEN54Q7Z6J9 526 aaKnown RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 CD163Q86VB7 1156 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 CYP4Z1Q86W10 505 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 LSRQ86X29 649 aaPredicted RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 PM20D2Q8IYS1 436 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 MEIOBQ8N635 442 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 GALNT11Q8NCW6 608 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 ELOA3Q8NG57 546 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 SLC25A43Q8WUT9 341 aaPredicted RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 SLC41A3Q96GZ6 507 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 WDYHV1Q96HA8 205 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 RSRC1Q96IZ7 334 aaKnown RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 C7orf34Q96L11 122 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 PRRC1Q96M27 445 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 SPENQ96T58 3664 aaKnown RBP13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 PRDM14Q9GZV8 571 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 MAGIXQ9H6Y5 334 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 C12orf10Q9HB07 376 aa13.94□□□□□ -0.18
RPRD1A-208ENST00000589050 PNPLA3Q9NST1 481 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms