RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 A0A087WZY1 265 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 NPIPA5A0A0B4J1W7 369 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 A0A0G2JPF8 293 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 TCRBV5S2A0A599 114 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 HNRNPCL2B2RXH8 293 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 HNRNPCL3B7ZW38 293 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 SHISA8B8ZZ34 492 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 EEF1E1-BLOC1S5C9J1V9 151 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 NPIPA7E9PJI5 369 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 GTPBP1O00178 669 aaKnown RBP13.05□□□□□ -0.32
COMMD4-225ENST00000569245 EEF1E1O43324 174 aaKnown RBP13.05□□□□□ -0.32
COMMD4-225ENST00000569245 HCRTR2O43614 444 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 ENTPD5O75356 428 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 NUDT14O95848 222 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 C8BP07358 591 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 CHRM4P08173 479 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 NPIPA8P0DM63 369 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 HNRNPCL4P0DMR1 293 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 IGFBP2P18065 325 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 ASCL1P50553 236 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF614Q8N883 585 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 ACBD4Q8NC06 268 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 RELL2Q8NC24 303 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-225ENST00000569245 B4GALNT2Q8NHY0 566 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 PMM1Q92871 262 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 C14orf79Q96F83 325 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 DUS3LQ96G46 650 aaKnown RBP13.05□□□□□ -0.32
COMMD4-225ENST00000569245 SDF2Q99470 211 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF559Q9BR84 538 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF350Q9GZX5 532 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 SLC24A3Q9HC58 644 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 POLE3Q9NRF9 147 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 DCAF13Q9NV06 445 aaKnown RBP13.05□□□□□ -0.32
COMMD4-225ENST00000569245 DSPPQ9NZW4 1301 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 CACNA1CQ13936 2221 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 FREM3P0C091 2139 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 A0A1W2PQD3 144 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SLC22A20A6NK97 555 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 H0YC42 278 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SYT5O00445 386 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 RCBTB2O95199 551 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 H6PDO95479 791 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 IFNA14P01570 189 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 UMPSP11172 480 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 ETS2P15036 469 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
COMMD4-225ENST00000569245 CRYBA2P53672 197 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 ATP12AP54707 1039 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
COMMD4-225ENST00000569245 DLX5P56178 289 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 HPCAP84074 193 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 FOXF2Q12947 444 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
COMMD4-225ENST00000569245 CD226Q15762 336 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SGCBQ16585 318 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 GPAT3Q53EU6 434 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 TYW3Q6IPR3 259 aaKnown RBP13.04□□□□□ -0.32
COMMD4-225ENST00000569245 PPP4R4Q6NUP7 873 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 CBLL1Q75N03 491 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SPATA24Q86W54 205 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 GCNT2Q8N0V5 402 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 RNF145Q96MT1 663 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 ZFP3Q96NJ6 502 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 UCN2Q96RP3 112 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF607Q96SK3 696 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SLC38A1Q9H2H9 487 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 MED17Q9NVC6 651 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 CLCF1Q9UBD9 225 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 RPS6KA6Q9UK32 745 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 SAMD4AQ9UPU9 718 aaKnown RBP13.04□□□□□ -0.32
COMMD4-225ENST00000569245 CARD8Q9Y2G2 431 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 GPC6Q9Y625 555 aaPredicted RBP13.04□□□□□ -0.32
COMMD4-225ENST00000569245 AP4B1Q9Y6B7 739 aa13.04□□□□□ -0.32
COMMD4-225ENST00000569245 M0QX08 132 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 MGRN1O60291 552 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 FCMRO60667 390 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 STX11O75558 287 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 SERPINB7O75635 380 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 TGM6O95932 706 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 IL18BPO95998 194 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 SERPINA1P01009 418 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 GPIP06744 558 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF17P17021 662 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 AQP1P29972 269 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 KIR2DL3P43628 341 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 CLDN20P56880 219 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 RPS3AP61247 264 aaKnown RBP13.03□□□□□ -0.32
COMMD4-225ENST00000569245 CHRNEQ04844 493 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 RIPK1Q13546 671 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 GPR68Q15743 365 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 LRRC23Q53EV4 343 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-225ENST00000569245 RPS26P11Q5JNZ5 115 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-225ENST00000569245 POMZP3Q6PJE2 187 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 FRRS1Q6ZNA5 592 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 EIF3MQ7L2H7 374 aaKnown RBP13.03□□□□□ -0.32
COMMD4-225ENST00000569245 ADGRE4PQ86SQ3 457 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 KRT73Q86Y46 540 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 RNASE6Q93091 150 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms