RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 CMKLR1Q99788 373 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 TMEM168Q9H0V1 697 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 SDHAF2Q9NX18 166 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 OR51B4Q9Y5P0 310 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 PIKFYVEQ9Y2I7 2098 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 TVP23AA6NH52 213 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 KHNYNO15037 678 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 LALBAP00709 142 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 SPARCP09486 303 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ZNF250P15622 560 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 PRSS3P35030 304 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 EXOSC7Q15024 291 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 SLC25A35Q3KQZ1 300 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ZNF628Q5EBL2 1059 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 FAM26DQ5JW98 314 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 TMIEQ8NEW7 156 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 OR5AK2Q8NH90 309 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 GOT1L1Q8NHS2 421 aaPredicted RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 ORAI1Q96D31 301 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 PTCHD1Q96NR3 888 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ZNF559Q9BR84 538 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ZNF350Q9GZX5 532 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 MTIF3Q9H2K0 278 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 SLC25A19Q9HC21 320 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 NOX4Q9NPH5 578 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ASF1BQ9NVP2 202 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 GPATCH2Q9NW75 528 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 HEBP2Q9Y5Z4 205 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 EIF1AYO14602 144 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 NPR2P20594 1047 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ATP5A1P25705 553 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 ITGB7P26010 798 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 EIF1AXP47813 144 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 NRG3P56975 720 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 AIMP2Q13155 320 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 ARFRP1Q13795 201 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 SMCO1Q147U7 214 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ARHGAP19Q14CB8 494 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 CNKSR3Q6P9H4 555 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ZNF620Q6ZNG0 422 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 BTN2A1Q7KYR7 527 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 TMEFF1Q8IYR6 380 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ZNF101Q8IZC7 436 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 SLC39A11Q8N1S5 342 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 DUSP19Q8WTR2 217 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ST8SIA4Q92187 359 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 TEAD3Q99594 435 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 SLC6A7Q99884 636 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 AIFM2Q9BRQ8 373 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 AUNIPQ9H7T9 357 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 B3GAT2Q9NPZ5 323 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 CAMK2AQ9UQM7 478 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 GPR171O14626 319 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 RGS11O94810 467 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 FGF9P31371 208 aaPredicted RBP9.79□□□□□ -0.84
USB1-212ENST00000566082 PCBP3P57721 371 aaKnown RBP9.79□□□□□ -0.84
USB1-212ENST00000566082 UBE2MP61081 183 aaKnown RBP9.79□□□□□ -0.84
USB1-212ENST00000566082 SIRPAP78324 504 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 MAPK14Q16539 360 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 DECR1Q16698 335 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ITPRIPL2Q3MIP1 535 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 GLYR1Q49A26 553 aaPredicted RBP9.79□□□□□ -0.84
USB1-212ENST00000566082 GSG1LQ6UXU4 331 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ARL14Q8N4G2 192 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 PFN4Q8NHR9 129 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 METTL21AQ8WXB1 218 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ELP4Q96EB1 424 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ZC3H10Q96K80 434 aaKnown RBP9.79□□□□□ -0.84
USB1-212ENST00000566082 BTBD2Q9BX70 525 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 SGPP1Q9BX95 441 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 FN3KQ9H479 309 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 METTL8Q9H825 291 aaKnown RBP9.79□□□□□ -0.84
USB1-212ENST00000566082 GSKIPQ9P0R6 139 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 REV1Q9UBZ9 1251 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 GPR34Q9UPC5 381 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 hCG_1807616A0A1W2PRN6 198 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ANKRD61A6NGH8 418 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 KRBOX1C9JBD0 128 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 SGK494L7N484 410 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 SYT5O00445 386 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 CDC40O60508 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
USB1-212ENST00000566082 ABLIM3O94929 683 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ATP1B1P05026 303 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 SBK2P0C263 348 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 OR8G3PP0DMU2 310 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ZNF35P13682 527 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 TYRP1P17643 537 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 EPHA5P54756 1037 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 MC2RQ01718 297 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 AANATQ16613 207 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 CDNFQ49AH0 187 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 GXYLT1Q4G148 440 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 FAM111BQ6SJ93 734 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 KLHL24Q6TFL4 600 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ZNF550Q7Z398 422 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 TECPR1Q7Z6L1 1165 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 ZNF546Q86UE3 836 aa9.79□□□□□ -0.84
USB1-212ENST00000566082 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms