RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZNF441Q8N8Z8 693 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ANKK1Q8NFD2 765 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 PHOSPHO1Q8TCT1 267 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF524Q96C55 264 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 CRELD1Q96HD1 420 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 KLHDC3Q9BQ90 382 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 AKIRIN1Q9H9L7 192 aaPredicted RBP8.63□□□□□ -1.03
LINC00838-201ENST00000562956 PALMDQ9NP74 551 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 SIGLEC7Q9Y286 467 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 SEC16AO15027 2179 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 C17orf51A8MQB3 221 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 EFCAB9A8MZ26 197 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 BHLHE40O14503 412 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 PRODHO43272 600 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 CSTF2P33240 577 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 TGFBR1P36897 503 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 MPLP40238 635 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 DUSP3P51452 185 aaPredicted RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 GAS1P54826 345 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 CRYZQ08257 329 aaKnown RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 SELENBP1Q13228 472 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 MED22Q15528 200 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 INAQ16352 499 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF528Q3MIS6 628 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 ARMCX4Q5H9R4 360 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 PAQR6Q6TCH4 344 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 OVCH1Q7RTY7 1134 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 SLC34A3Q8N130 599 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 BBS1Q8NFJ9 593 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 OR52I1Q8NGK6 324 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 OR51A7Q8NH64 312 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 C9orf43Q8TAL5 461 aaPredicted RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 NDNFQ8TB73 568 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 LGALS12Q96DT0 336 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 PRRG3Q9BZD7 231 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 MRTO4Q9UKD2 239 aaKnown RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 TMEM5Q9Y2B1 443 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 NUP210LQ5VU65 1888 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 VSTM2BA6NLU5 285 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 KDM4EB2RXH2 506 aaPredicted RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 TO15178 435 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 TSPAN2O60636 221 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 ALOX12BO75342 701 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 PTP4A3O75365 173 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 ABCD3P28288 659 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 IL12BP29460 328 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 COPZ1P61923 177 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 NCS1P62166 190 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 PLCXD2Q0VAA5 305 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 DBPQ10586 325 aaPredicted RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 FHL1Q13642 323 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 SLC35F1Q5T1Q4 408 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 AADACL4Q5VUY2 407 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 SMARCD3Q6STE5 483 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 C16orf47Q6ZP98 133 aaPredicted RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF367Q7RTV3 350 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 BMPERQ8N8U9 685 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 APCDD1LQ8NCL9 501 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 C3orf49Q96BT1 292 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 OMA1Q96E52 524 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 TEX12Q9BXU0 123 aa8.62□□□□□ -1.03
LINC00838-201ENST00000562956 LSM2Q9Y333 95 aaKnown RBP8.62□□□□□ -1.03
LINC00838-201ENST00000562956 A0A087WUJ7 227 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ANKRD34BA5PLL1 514 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 FAM183AA6NL82 134 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 OR6C76A6NM76 312 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 GTPBP1O00178 669 aaKnown RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 MEN1O00255 615 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 FGF5P12034 268 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 CCL4P13236 92 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF28P17035 718 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 GADD45AP24522 165 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 CCR4P51679 360 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ZFP36L1Q07352 338 aaKnown RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 OXA1LQ15070 435 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 FAM69BQ5VUD6 431 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 SLC46A3Q7Z3Q1 461 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 OAFQ86UD1 273 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 SLCO6A1Q86UG4 719 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF440Q8IYI8 595 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 CYP4Z2PQ8N1L4 340 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 NFAM1Q8NET5 270 aaPredicted RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 OR52L1Q8NGH7 329 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 RNFT2Q96EX2 444 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 TNFRSF13CQ96RJ3 184 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 DIMT1Q9UNQ2 313 aaKnown RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 LRRN3E7EW58 273 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF264O43296 627 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 GMFGO60234 142 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 RCBTB2O95199 551 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ONECUT2O95948 504 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 HBQ1P09105 142 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 BMP7P18075 431 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 MST1P26927 711 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 GRK5P34947 590 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ETV5P41161 510 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 MTNR1AP48039 350 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 RGS6P49758 472 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 ETV1P50549 477 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms