RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 AMER3Q8N944 861 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 TMEM185AQ8NFB2 350 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 WDR34Q96EX3 536 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 TEAD3Q99594 435 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 MACROD1Q9BQ69 325 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 C1QTNF2Q9BXJ5 285 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 SEMA4CQ9C0C4 833 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 TAS2R5Q9NYW4 299 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 KPNA3O00505 521 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 TEAD1P28347 426 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 GABRR2P28476 465 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 CLDN2P57739 230 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 FZD5Q13467 585 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 DECR1Q16698 335 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 ING5Q8WYH8 240 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 NR4A3Q92570 626 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 TCEAL4Q96EI5 215 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 PDCD1LG2Q9BQ51 273 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 BCL2L10Q9HD36 194 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 NEDD8-MDP1E9PL57 170 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 GABARAPH6UMI1 98 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 POP7O75817 140 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 SBK2P0C263 348 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 FAUP35544 74 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 GPNMBQ14956 572 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 OR5M9Q8NGP3 310 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 CDV3Q9UKY7 258 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 IRAK3Q9Y616 596 aa11.91□□□□□ -0.5
SFSWAP-209ENST00000540469 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ACOD1A6NK06 481 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF879B4DU55 563 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 SIGLEC6O43699 453 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 LATS1O95835 1130 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 PSMB10P40306 273 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 GPR1P46091 355 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 POLR2GP62487 172 aaKnown RBP eCLIP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 FGL1Q08830 312 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 B3GNTL1Q67FW5 361 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 NAXDQ8IW45 347 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF461Q8TAF7 563 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ZMYND19Q96E35 227 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 OR7D2Q96RA2 312 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 CPEB1Q9BZB8 566 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 DNTTIP1Q9H147 329 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ANKRD19PQ9H560 264 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 TMEM185BQ9H7F4 350 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 CXXC1Q9P0U4 656 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 EDARQ9UNE0 448 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 SLC6A5Q9Y345 797 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 PPIL1Q9Y3C6 166 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 OR10H1Q9Y4A9 318 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 PCDHGA5Q9Y5G8 931 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 CACNA1CQ13936 2221 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 PRSS44E7EML9 344 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 GSTZ1O43708 216 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 NDUFS6O75380 124 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 SC5DO75845 299 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 RASGRP1O95267 797 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 MC3RP41968 323 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 AKR1C2P52895 323 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ART1P52961 327 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 AKR1C1Q04828 323 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 FUT5Q11128 374 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ATXN7L3Q14CW9 347 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF626Q68DY1 528 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 CCDC36Q8IYA8 594 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 SYNPRQ8TBG9 265 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 THEM6Q8WUY1 208 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 HS6ST2Q96MM7 605 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 FBXL4Q9UKA2 621 aa11.9□□□□□ -0.5
SFSWAP-209ENST00000540469 PYCARD-AS1I3L0S3 204 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 HYAL3O43820 417 aaPredicted RBP11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 FCMRO60667 390 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 GALR3O60755 368 aaPredicted RBP11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 EGFP01133 1207 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 CPN1P15169 458 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 ZNF3P17036 446 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 ACHEP22303 614 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 CRMP1Q14194 572 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 LRRC37A5PQ49AS3 106 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 FAM26DQ5JW98 314 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 SLC8B1Q6J4K2 584 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 KLHDC8AQ8IYD2 350 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 FAM98AQ8NCA5 519 aaKnown RBP11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 NUP43Q8NFH3 380 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 OR56A1Q8NGH5 318 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 SETD7Q8WTS6 366 aaKnown RBP11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 CYB5D2Q8WUJ1 264 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 INPP5EQ9NRR6 644 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 SIDT1Q9NXL6 827 aaKnown RBP11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 CALML5Q9NZT1 146 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 OPN4Q9UHM6 478 aa11.9□□□□□ -0.51
SFSWAP-209ENST00000540469 KIAA0100Q14667 2235 aaKnown RBP11.89□□□□□ -0.51
SFSWAP-209ENST00000540469 OR5K4A6NMS3 321 aa11.89□□□□□ -0.51
SFSWAP-209ENST00000540469 LINC00587B1AMM8 73 aa11.89□□□□□ -0.51
SFSWAP-209ENST00000540469 SYT5O00445 386 aa11.89□□□□□ -0.51
SFSWAP-209ENST00000540469 CDC123O75794 336 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms