RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 SAMD4AQ9UPU9 718 aaKnown RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SLC22A14Q9Y267 594 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CHCHD2Q9Y6H1 151 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ARHGAP21Q5T5U3 1957 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 EML6Q6ZMW3 1958 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CHD3Q12873 2000 aaKnown RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 DSCAMO60469 2012 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 NOTCH1P46531 2555 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 LRRC3CA6NJW4 275 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 DEFB108AA8MXU0 73 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 EVPLLA8MZ36 301 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 FAM220BPB1ANY3 271 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 KDM4EB2RXH2 506 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CXCR6O00574 342 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 MSTNO14793 375 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 RGS10O43665 173 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 RSL1D1O76021 490 aaKnown RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 SOX30O94993 753 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ETHE1O95571 254 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ANGPTL1O95841 491 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 GUCA1CO95843 209 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 APOA1P02647 267 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 IGKV3-11P04433 115 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PRPS2P11908 318 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CD247P20963 164 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PCMT1P22061 227 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ELK4P28324 431 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 S100A5P33763 92 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 THBS2P35442 1172 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 IDUAP35475 653 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 HPCAL1P37235 193 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CD79BP40259 229 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 GSSP48637 474 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PRIM2P49643 509 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 HNMTP50135 292 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 WNT3P56703 355 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 UFM1P61960 85 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CD47Q08722 323 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 FAM27E3Q08E93 113 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 FOXF2Q12947 444 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CDK5R2Q13319 367 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TNK1Q13470 666 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TOMM20Q15388 145 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 OR4D1Q15615 310 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 NPTX1Q15818 432 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CTF1Q16619 201 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ADPRMQ3LIE5 342 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ZIK1Q3SY52 487 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 RUNDC3AQ59EK9 446 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PAGE2BQ5JRK9 111 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CDKL4Q5MAI5 379 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 WIPI1Q5MNZ9 446 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TMEM53Q6P2H8 277 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ERICH5Q6P6B1 374 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ABHD17CQ6PCB6 329 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 SLC29A4Q7RTT9 530 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ADAMTSL2Q86TH1 951 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 P2RY8Q86VZ1 359 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 MICU2Q8IYU8 434 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 C9orf106Q8NAJ2 232 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TMEM52Q8NDY8 209 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 C17orf50Q8WW18 174 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 RASSF5Q8WWW0 418 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 MYDGFQ969H8 173 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 FAM162AQ96A26 154 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TP53INP1Q96A56 240 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ANKRD9Q96BM1 317 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 INTS12Q96CB8 462 aaKnown RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 REPS1Q96D71 796 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 LGALS12Q96DT0 336 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 YIPF6Q96EC8 236 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TRMT61AQ96FX7 289 aaKnown RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PYURFQ96I23 114 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TXNDC15Q96J42 360 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 QRFPRQ96P65 431 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 GNRHR2Q96P88 292 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 DGAT2Q96PD7 388 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TBCDQ9BTW9 1192 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 MED18Q9BUE0 208 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 THUMPD3Q9BV44 507 aaKnown RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 SPATA9Q9BWV2 254 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ANGPTL4Q9BY76 406 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 REG4Q9BYZ8 158 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 DPY30Q9C005 99 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 AICDAQ9GZX7 198 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 NAA50Q9GZZ1 169 aaKnown RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 RACGAP1Q9H0H5 632 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 UBQLN3Q9H347 655 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 TUBB1Q9H4B7 451 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 KAT8Q9H7Z6 458 aaKnown RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ACTR8Q9H981 624 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 LYRM4Q9HD34 91 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PRDM7Q9NQW5 492 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 INIPQ9NRY2 104 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 PLCXD1Q9NUJ7 323 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 DCAF13Q9NV06 445 aaKnown RBP5.4□□□□□ -1.54
CPSF7-219ENST00000539952 MS4A12Q9NXJ0 267 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 CD274Q9NZQ7 290 aa5.4□□□□□ -1.54
CPSF7-219ENST00000539952 ENOPH1Q9UHY7 261 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms