RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 GLYATL1Q969I3 302 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 RAB7BQ96AH8 199 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ANKRD9Q96BM1 317 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 C12orf43Q96C57 262 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 C11orf24Q96F05 449 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 WBP1Q96G27 269 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 DUS3LQ96G46 650 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PDXPQ96GD0 296 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 DCUN1D1Q96GG9 259 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CNOT6LQ96LI5 555 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 TNFRSF13CQ96RJ3 184 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PSMB7Q99436 277 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ATF6BQ99941 703 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF577Q9BSK1 485 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 NTMT1Q9BV86 223 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 OSBPL11Q9BXB4 747 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CALN1Q9BXU9 219 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 GCOM2Q9BZD3 368 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 STRADBQ9C0K7 418 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 OR51B5Q9H339 312 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CDC42EP4Q9H3Q1 356 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 GOLPH3Q9H4A6 298 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 RNF41Q9H4P4 317 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ARMC7Q9H6L4 198 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 LRRC19Q9H756 370 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 RPF2Q9H7B2 306 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 GPN2Q9H9Y4 310 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 WDR41Q9HAD4 459 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 SIAEQ9HAT2 523 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 NMUR1Q9HB89 426 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ANKHQ9HCJ1 492 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 HMG20AQ9NP66 347 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 FAM212BQ9NTI7 297 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC35D1Q9NTN3 355 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PIGVQ9NUD9 493 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 VPS54Q9P1Q0 977 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CTSZQ9UBR2 303 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 AP3M1Q9Y2T2 418 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 AUP1Q9Y679 476 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 AP4B1Q9Y6B7 739 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 DCCP43146 1447 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 NWD1Q149M9 1564 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PCNX3Q9H6A9 2034 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 MYO3BQ8WXR4 1341 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 A2ML1A8K2U0 1454 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 MYH1P12882 1939 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 MYH2Q9UKX2 1941 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ECM29Q5VYK3 1845 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ATAD5Q96QE3 1844 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 CHD1O14646 1710 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 MON2Q7Z3U7 1717 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TRPC5OSA6NMA1 111 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 GOLGA8JA6NMD2 632 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ARHGEF33A8MVX0 844 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 H3BMQ9 156 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 EEF2KO00418 725 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 LAD1O00515 517 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 KIAA0513O60268 411 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 KLHL41O60662 606 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TOM1O60784 492 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SPAG6O75602 509 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 CLPXO76031 633 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 OR5F1O95221 314 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SNAPINO95295 136 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 FGGP02679 453 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SERPINA6P08185 405 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SNRPAP09012 282 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 POLR2MP0CAP2 368 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 KRT13P13646 458 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 PSMC3P17980 439 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 FCARP24071 287 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SHC1P29353 583 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 IL12AP29459 219 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 OR1D2P34982 312 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 RCVRNP35243 200 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 HSD17B2P37059 387 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TAGLN2P37802 199 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 MAGEA4P43358 317 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 NAMPTP43490 491 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 HAAOP46952 286 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 PITPNBP48739 271 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 HCAR3P49019 387 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 DHPSP49366 369 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 FHITP49789 147 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ATP4BP51164 291 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 RIDAP52758 137 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 METAP1P53582 386 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 GEMP55040 296 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 AP1S2P56377 157 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ACTR1AP61163 376 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 POLR2GP62487 172 aaKnown RBP eCLIP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SCRN3Q0VDG4 424 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 BST2Q10589 180 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 NAB1Q13506 487 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 OR1C1Q15619 314 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TRIP10Q15642 601 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TRIP13Q15645 432 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TSC22D1Q15714 1073 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 LRIT3Q3SXY7 679 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 MPPE1Q53F39 396 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms