RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	HNRNPCL1	O60812	293 aa	Known RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	BCAS1	O75363	584 aa	Predicted RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	TNFSF13	O75888	250 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	PLG	P00747	810 aa	Predicted RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	CRH	P06850	196 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	TFPT	P0C1Z6	253 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	LINGO3	P0C6S8	592 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	HNRNPCL4	P0DMR1	293 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	ARAF	P10398	606 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	TFPI	P10646	304 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	NID1	P14543	1247 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	PRKCA	P17252	672 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	HOXB9	P17482	250 aa	Predicted RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	IL11	P20809	199 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC7A1	P30825	629 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	PGM1	P36871	562 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	SUCLG1	P53597	346 aa	Known RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	CLDN15	P56746	228 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	SIRPA	P78324	504 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	CDK6	Q00534	326 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	SELPLG	Q14242	412 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	PON3	Q15166	354 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	TRMT5	Q32P41	509 aa	Known RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	RUNDC3A	Q59EK9	446 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF311	Q5JNZ3	666 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	HBM	Q6B0K9	141 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF836	Q6ZNA1	936 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	KRT73	Q86Y46	540 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	LILRA2	Q8N149	483 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	CNEP1R1	Q8N9A8	125 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	PCYOX1L	Q8NBM8	494 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	POC1B	Q8TC44	478 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	TSPEAR	Q8WU66	669 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	INTS12	Q96CB8	462 aa	Known RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	DNAJA3	Q96EY1	480 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	KLHL15	Q96M94	604 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	ANKRD27	Q96NW4	1050 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	ALPK1	Q96QP1	1244 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	LIME1	Q9H400	295 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	IKZF5	Q9H5V7	419 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	SERINC1	Q9NRX5	453 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	GALNT8	Q9NY28	637 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	PACSIN3	Q9UKS6	424 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	FBP2	O00757	339 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	AP3D1	O14617	1153 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	CXCL13	O43927	109 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	GUSB	P08236	651 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	GKN3P	P0CG01	181 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	DRD4	P21917	467 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	ELK4	P28324	431 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC6A8	P48029	635 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	CPA2	P48052	419 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	IDH2	P48735	452 aa	Known RBP	11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	SESN3	P58005	492 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	RAC1	P63000	192 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	SELENBP1	Q13228	472 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	TMEM44	Q2T9K0	475 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	REEP3	Q6NUK4	255 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	DLEU7	Q6UYE1	221 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	MTDH	Q86UE4	582 aa	Known RBP	11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	TGIF2LY	Q8IUE0	185 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	CMIP	Q8IY22	773 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	C10orf111	Q8N326	155 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	CADM2	Q8N3J6	435 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	DPP10	Q8N608	796 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	OR10D3	Q8NH80	312 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	OR2V1	Q8NHB1	315 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	OIT3	Q8WWZ8	545 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	FIG4	Q92562	907 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	RCN3	Q96D15	328 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	REXO5	Q96IC2	774 aa	Known RBP	11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	MRGPRX4	Q96LA9	322 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	DACH2	Q96NX9	599 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	OR5B2	Q96R09	309 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF607	Q96SK3	696 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	SPATA5L1	Q9BVQ7	753 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	RBM24	Q9BX46	236 aa	Known RBP	11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	RLIM	Q9NVW2	624 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	GID8	Q9NWU2	228 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	MCTS1	Q9ULC4	181 aa	Known RBP	11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	EDAR	Q9UNE0	448 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	IFT52	Q9Y366	437 aa		11.4	□□□□□ -0.58
FDPS-204	ENST00000461507	TRBV5-3	A0A0A0MS03	114 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507		A0A1W2PNV4	684 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	C7orf72	A4D263	438 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	CFAP73	A6NFT4	308 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507		A8MXE2	369 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	MSTN	O14793	375 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	AIM2	O14862	343 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.39	□□□□□ -0.59	6e-7	■■■□□ 14.6
FDPS-204	ENST00000461507	PGM3	O95394	542 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	TGM6	O95932	706 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	HRG	P04196	525 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	PABPC4L	P0CB38	370 aa	Known RBP	11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	DNASE1	P24855	282 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	NCALD	P61601	193 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	COPZ1	P61923	177 aa		11.39	□□□□□ -0.59
FDPS-204	ENST00000461507	MAPK11	Q15759	364 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms