RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 FBXW8Q8N3Y1 598 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 METTL25Q8N6Q8 603 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 BEND2Q8NDZ0 799 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 NUDT10Q8NFP7 164 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 OR9A2Q8NGT5 310 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 PSMA8Q8TAA3 256 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 RNF138Q8WVD3 245 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ST8SIA2Q92186 375 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TFAP2CQ92754 450 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 PPCDCQ96CD2 204 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TUBGCP3Q96CW5 907 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ZBED6CLQ96FA7 236 aaPredicted RBP4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 NUDT11Q96G61 164 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 LCORQ96JN0 433 aaPredicted RBP4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 EGLN2Q96KS0 407 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 VSTM2LQ96N03 204 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 GPR137Q96N19 417 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 AMDHD1Q96NU7 426 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TSSK3Q96PN8 268 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 BBS4Q96RK4 519 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 SYT3Q9BQG1 590 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CCDC106Q9BWC9 280 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 HES7Q9BYE0 225 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TRIM4Q9C037 500 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 GLIPR2Q9H4G4 154 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CLMPQ9H6B4 373 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 MEAF6Q9HAF1 191 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 COQ3Q9NZJ6 369 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 VSX1Q9NZR4 365 aaPredicted RBP4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CNIH4Q9P003 139 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 EXTL2Q9UBQ6 330 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 VPS4AQ9UN37 437 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 RABL2BQ9UNT1 228 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ERVK-11Q9UQG0 969 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 EIF3LQ9Y262 564 aaKnown RBP4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 FIS1Q9Y3D6 152 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 POMT1Q9Y6A1 747 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 NBASA2RRP1 2371 aa4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 HELZ2Q9BYK8 2649 aaKnown RBP4.24□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ATP6AP2A0A1C7CYW4 349 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 OR6C70A6NIJ9 312 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 FAM90A8PA6NJQ4 464 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TRPC5OSA6NMA1 111 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 SDHDO14521 159 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TP53I11O14683 189 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ANKRD28O15084 1053 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 HCRTR2O43614 444 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 PEX1O43933 1283 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 PEX11AO75192 247 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ATP6AP2O75787 350 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 GLSO94925 669 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 SOX30O94993 753 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 PRSS23O95084 383 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 SNX4O95219 450 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 P04436 131 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 STSP08842 583 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 FAM90A13PP0C7W8 464 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 FAM90A24PP0C7X0 464 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CT45A8P0DMV1 189 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CT45A9P0DMV2 189 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CCL3P10147 92 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ZNF24P17028 368 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TMEM11P17152 192 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 LBPP18428 481 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CNR1P21554 472 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 MAP3K8P41279 467 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 MC3RP41968 323 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 GATA4P43694 442 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 MRPL19P49406 292 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CLK3P49761 638 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 NPY4RP50391 375 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ANXA11P50995 505 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 NR0B1P51843 470 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 NCBP2P52298 156 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CLDN8P56748 225 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 RPP38P78345 283 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 IRX1P78414 480 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 MRPS22P82650 360 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 HTD2P86397 168 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 SNTA1Q13424 505 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 HLXQ14774 488 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 EXOSC7Q15024 291 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 LTB4RQ15722 352 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ANKDD1AQ495B1 522 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TRMT12Q53H54 448 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ZNF385BQ569K4 471 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CT45A2Q5DJT8 189 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 NHSL2Q5HYW2 709 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 IL23RQ5VWK5 629 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 SLC22A10Q63ZE4 541 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 ZCCHC12Q6PEW1 402 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 C16orf89Q6UX73 402 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 IL20RBQ6UXL0 311 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 TMEM64Q6YI46 380 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 C16orf47Q6ZP98 133 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 Q6ZPB1 254 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 MDGA2Q7Z553 956 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 SPATA19Q7Z5L4 167 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 STK32CQ86UX6 486 aa4.23□□□□□ -1.73
RNU6ATAC28P-201ENST00000459249 CD163Q86VB7 1156 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms