RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MAGED1Q9Y5V3 778 aaPredicted RBP18.36■□□□□ 0.53
CPNE1-219ENST00000440240 SPIN1Q9Y657 262 aaPredicted RBP18.36■□□□□ 0.53
CPNE1-219ENST00000440240 COL6A5A8TX70 2615 aa18.36■□□□□ 0.53
CPNE1-219ENST00000440240 SONP18583 2426 aaKnown RBP18.35■□□□□ 0.53
CPNE1-219ENST00000440240 ANKRD28O15084 1053 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 MYZAPP0CAP1 466 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 CREB1P16220 341 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 PDK3Q15120 406 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 SEZ6L2Q6UXD5 910 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 ATG4DQ86TL0 474 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-219ENST00000440240 KBTBD8Q8NFY9 601 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 RADILQ96JH8 1075 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 REG4Q9BYZ8 158 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 DPY30Q9C005 99 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 ALG2Q9H553 416 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 AKTIPQ9H8T0 292 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 FAIMQ9NVQ4 179 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 WDR45Q9Y484 360 aa18.35■□□□□ 0.53
CPNE1-219ENST00000440240 IGKV3D-15A0A087WSY6 115 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 RNF223E7ERA6 249 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 SNUPNO95149 360 aaKnown RBP18.34■□□□□ 0.53
CPNE1-219ENST00000440240 PGM3O95394 542 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 OR12D1P0DN82 309 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 TFPIP10646 304 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 COX5AP20674 150 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 UQCRC2P22695 453 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 IGHV1-2P23083 117 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 PGM1P36871 562 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 CDKN1AP38936 164 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 VSNL1P62760 191 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 PGGHGQ32M88 737 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 ZNF563Q8TA94 476 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 ZHX1-C8orf76Q96EF9 292 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 SAP130Q9H0E3 1048 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 SLCO5A1Q9H2Y9 848 aa18.34■□□□□ 0.53
CPNE1-219ENST00000440240 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-219ENST00000440240 CENPVL1A0A0U1RR11 272 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 OR5H1A6NKK0 313 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 ITM2AO43736 263 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 KIAA0513O60268 411 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 CRLF1O75462 422 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 CPSF4O95639 269 aaKnown RBP18.33■□□□□ 0.52
CPNE1-219ENST00000440240 SERPINE1P05121 402 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 CLK1P49759 484 aaKnown RBP18.33■□□□□ 0.52
CPNE1-219ENST00000440240 FAPQ12884 760 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 PDCD2Q16342 344 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-219ENST00000440240 FBXW9Q5XUX1 488 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 EMBQ6PCB8 327 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 KIRREL3Q8IZU9 778 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 FAM71CQ8NEG0 241 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 TESCQ96BS2 214 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 PPP1R36Q96LQ0 422 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 MDFIQ99750 246 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 TMEM109Q9BVC6 243 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 CCDC106Q9BWC9 280 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 BARX1Q9HBU1 254 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-219ENST00000440240 CHRNA9Q9UGM1 479 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 NOSIPQ9Y314 301 aaKnown RBP18.33■□□□□ 0.52
CPNE1-219ENST00000440240 HDGFL3Q9Y3E1 203 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 RAP2CQ9Y3L5 183 aa18.33■□□□□ 0.52
CPNE1-219ENST00000440240 GPR171O14626 319 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 BIRC5O15392 142 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 DNPH1O43598 174 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 RAMP1O60894 148 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 SCN2BO60939 215 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 PMS2P2O95744 297 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 TP53P04637 393 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 THBS1P07996 1170 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 EDNRAP25101 427 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 CASP9P55211 416 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 ABCE1P61221 599 aaKnown RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 KCNJ10P78508 379 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 DMTNQ08495 405 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 MAPK14Q16539 360 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 DPY19L1Q2PZI1 675 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 TYW3Q6IPR3 259 aaKnown RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 OLIG3Q7RTU3 272 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 GRINAQ7Z429 371 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 UBE2J2Q8N2K1 259 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 ZNF433Q8N7K0 673 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 ZNF781Q8N8C0 355 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 AENQ8WTP8 325 aaKnown RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 RAB8BQ92930 207 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 APH1AQ96BI3 265 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 ROPN1LQ96C74 230 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 HS6ST2Q96MM7 605 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 TRAF4Q9BUZ4 470 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 EXOSC3Q9NQT5 275 aaKnown RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 CTPS2Q9NRF8 586 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-219ENST00000440240 MGAT4BQ9UQ53 548 aa18.32■□□□□ 0.52
CPNE1-219ENST00000440240 GOLGA8QA0A0J9YX86 632 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 CIB4A0PJX0 185 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 WDR91A4D1P6 747 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 GOLGA8OA6NCC3 632 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 SHISA9B4DS77 424 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 GOLGA8NF8WBI6 632 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 ABCD4O14678 606 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 CD8AP01732 235 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 RYKP34925 604 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms