RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF773Q6PK81 442 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF440Q8IYI8 595 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 ESX1Q8N693 406 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 NLGN4YQ8NFZ3 816 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 OR10G3Q8NGC4 313 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 HGDQ93099 445 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 RASL10BQ96S79 203 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 YTHDF1Q9BYJ9 559 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 LAT2Q9GZY6 243 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 TBC1D23Q9NUY8 699 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 MED31Q9Y3C7 131 aa11.14□□□□□ -0.63
SPTBN1-203ENST00000389980 A0A1W2PQD3 144 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 B4DXG7 233 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 ITGA10O75578 1167 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 GABRB1P18505 474 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 SOX3P41225 446 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 STAT5AP42229 794 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 NUDT6P53370 316 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 CDC42P60953 191 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 GABREP78334 506 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 PRKCDQ05655 676 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 IL10RAQ13651 578 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 EXT1Q16394 746 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 LINC00114Q6XXX2 140 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 RASSF6Q6ZTQ3 369 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF563Q8TA94 476 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 ISOC1Q96CN7 298 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 BPIFA2Q96DR5 249 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 EXOSC3Q9NQT5 275 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 MED13Q9UHV7 2174 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 AKAP13Q12802 2813 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 HTR3EA5X5Y0 456 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 LRRN3E7EW58 273 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 RAD1O60671 282 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 HTR1AP08908 422 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 GIPRP48546 466 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 MLLT10P55197 1068 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 CRYZQ08257 329 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 Q0VFX4 171 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 EFR3AQ14156 821 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 SSPNQ14714 243 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 BCL2A1Q16548 175 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 SLX4IPQ5VYV7 408 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 WBP2NLQ6ICG8 309 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 POMZP3Q6PJE2 187 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 PTCHD4Q6ZW05 846 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 BCDIN3DQ7Z5W3 292 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 RNF113BQ8IZP6 322 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 M1APQ8TC57 530 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 DNAJA4Q8WW22 397 aaPredicted RBP11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 OIT3Q8WWZ8 545 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 RELTQ969Z4 430 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF426Q9BUY5 554 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 CCDC90BQ9GZT6 254 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 ENKD1Q9H0I2 346 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 IRF2BPLQ9H1B7 796 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 MMP25Q9NPA2 562 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 TVP23BQ9NYZ1 205 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 SELENONQ9NZV5 590 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 FBXL4Q9UKA2 621 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 ICAM5Q9UMF0 924 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 HRH3Q9Y5N1 445 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 CPAMD8Q8IZJ3 1885 aa11.13□□□□□ -0.63
SPTBN1-203ENST00000389980 MED12Q93074 2177 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 TRAV27A0A087WT01 109 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 A0A087WUJ7 227 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 UNC119BA6NIH7 251 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 CDC40O60508 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 FOXD2O60548 495 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 FAM20BO75063 409 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 CH25HO95992 272 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 IGHEP01854 428 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 CD63P08962 238 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 SAGP10523 405 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 CCNA2P20248 432 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 FXYD6P3P58550 94 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 CDK5Q00535 292 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 BROXQ5VW32 411 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 C12orf73Q69YU5 71 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC30A6Q6NXT4 461 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 DEPDC4Q8N2C3 294 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 TCEANCQ8N8B7 351 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 OR13C2Q8NGS9 318 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 TEX47Q8TBZ9 253 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 BORCS5Q969J3 196 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 C12orf43Q96C57 262 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 TMCO6Q96DC7 493 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 DNAJA3Q96EY1 480 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 SAMD8Q96LT4 415 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 CDCP1Q9H5V8 836 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 P4HTMQ9NXG6 502 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 IL17BQ9UHF5 180 aa11.12□□□□□ -0.63
SPTBN1-203ENST00000389980 STMND1H3BQB6 276 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 TERTO14746 1132 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 FBXO45P0C2W1 286 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 TACR3P29371 465 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms