RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GHITMQ9H3K2 345 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 HPXP02790 462 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 STOMP27105 288 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 NDUFS1P28331 727 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ACSM1Q08AH1 577 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 NDUFAF6Q330K2 333 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF542PQ5EBM4 170 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 FBXO42Q6P3S6 717 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 COX18Q8N8Q8 333 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 YIPF5Q969M3 257 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 DNAJA3Q96EY1 480 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 NARFLQ9H6Q4 476 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ERVMER34-1Q9H9K5 563 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 HRGP04196 525 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 RAB3BP20337 219 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 GABRA3P34903 492 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 IGFALSP35858 605 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 PLAURQ03405 335 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 HEPHL1Q6MZM0 1159 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 RANBP3LQ86VV4 465 aaPredicted RBP18.35■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF433Q8N7K0 673 aaPredicted RBP18.35■□□□□ 0.53
CRLF3-201ENST00000324238 OR52E2Q8NGJ4 325 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 PGLYRP3Q96LB9 341 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 FKRPQ9H9S5 495 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 ING4Q9UNL4 249 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 SSNA1O43805 119 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 RNGTTO60942 597 aaKnown RBP18.35■□□□□ 0.53
CRLF3-201ENST00000324238 CT62P0C5K7 136 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF81P51508 661 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 DCST2Q5T1A1 773 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 HES5Q5TA89 166 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 SIGIRRQ6IA17 410 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 PARM1Q6UWI2 310 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 GID4Q8IVV7 300 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 GJD3Q8N144 294 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 MFSD9Q8NBP5 474 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 OR4N2Q8NGD1 307 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 FGF14Q92915 247 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 TMEM106CQ9BVX2 250 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 MED17Q9NVC6 651 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 STMN3Q9NZ72 180 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 ADAM18Q9Y3Q7 739 aa18.35■□□□□ 0.53
CRLF3-201ENST00000324238 FAM86C2PA6NEL3 165 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 NGFRP08138 427 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 CPMP14384 443 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 POLR2CP19387 275 aaPredicted RBP18.34■□□□□ 0.53
CRLF3-201ENST00000324238 F8A1P23610 371 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 CRYZQ08257 329 aaKnown RBP18.34■□□□□ 0.53
CRLF3-201ENST00000324238 RIN1Q13671 783 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 TMEM255AQ5JRV8 349 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 BICRALQ6AI39 1079 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF680Q8NEM1 530 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 OR4C6Q8NH72 309 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF671Q8TAW3 534 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 GIMAP1Q8WWP7 306 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 MOAP1Q96BY2 351 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 C1QTNF6Q9BXI9 259 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 DPAGT1Q9H3H5 408 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 SIGLEC7Q9Y286 467 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 DUXAA6NLW8 204 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 PBX2P40425 430 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 PER3P56645 1201 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 RPL6Q02878 288 aaKnown RBP18.34■□□□□ 0.53
CRLF3-201ENST00000324238 ACOT12Q8WYK0 555 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 PITHD1Q9GZP4 211 aaPredicted RBP18.34■□□□□ 0.53
CRLF3-201ENST00000324238 KCMF1Q9P0J7 381 aa18.34■□□□□ 0.53
CRLF3-201ENST00000324238 FGF17O60258 216 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 GMDSO60547 372 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 TFP02787 698 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 TOR2AQ5JU69 321 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 ZBTB37Q5TC79 503 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 OTPQ5XKR4 325 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 ASPGQ86U10 573 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 LNX2Q8N448 690 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF527Q8NB42 609 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 FAM98AQ8NCA5 519 aaKnown RBP18.33■□□□□ 0.53
CRLF3-201ENST00000324238 OR51Q1Q8NH59 317 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 BRIX1Q8TDN6 353 aaKnown RBP18.33■□□□□ 0.53
CRLF3-201ENST00000324238 RAB7BQ96AH8 199 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 WDR89Q96FK6 387 aaPredicted RBP18.33■□□□□ 0.53
CRLF3-201ENST00000324238 FOLH1BQ9HBA9 442 aa18.33■□□□□ 0.53
CRLF3-201ENST00000324238 EIF3KQ9UBQ5 218 aaKnown RBP18.33■□□□□ 0.53
CRLF3-201ENST00000324238 RIIAD1A6NNX1 92 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 LINC01565O15544 149 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 BMP8BP34820 402 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 ACTR1BP42025 376 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 ACTR1AP61163 376 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 STPG1Q5TH74 334 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 ZNF425Q6IV72 752 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 BMP8AQ7Z5Y6 402 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 CCDC28AQ8IWP9 274 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 CEP76Q8TAP6 659 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 AHCYL2Q96HN2 611 aaKnown RBP18.33■□□□□ 0.52
CRLF3-201ENST00000324238 ERMAPQ96PL5 475 aaPredicted RBP18.33■□□□□ 0.52
CRLF3-201ENST00000324238 CMC2Q9NRP2 79 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 GNG8Q9UK08 70 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 ACOD1A6NK06 481 aa18.33■□□□□ 0.52
CRLF3-201ENST00000324238 TRIM3O75382 744 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms